Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubp1Q811S7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubp1Q811S7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ubp1Q811S7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.08■□□□□ 0.97
Ubp1Q811S7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.08■□□□□ 0.97
Ubp1Q811S7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.08■□□□□ 0.97
Ubp1Q811S7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Ubp1Q811S7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubp1Q811S7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubp1Q811S7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubp1Q811S7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubp1Q811S7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubp1Q811S7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubp1Q811S7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubp1Q811S7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubp1Q811S7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubp1Q811S7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ubp1Q811S7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Gm13238-201ENSMUST00000117655 780 ntBASIC21.04■□□□□ 0.96
Ubp1Q811S7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.04■□□□□ 0.96
Ubp1Q811S7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubp1Q811S7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ubp1Q811S7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ubp1Q811S7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubp1Q811S7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.03■□□□□ 0.96
Ubp1Q811S7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.03■□□□□ 0.96
Ubp1Q811S7 Gm45444-201ENSMUST00000211394 898 ntBASIC21.03■□□□□ 0.96
Ubp1Q811S7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ubp1Q811S7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubp1Q811S7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubp1Q811S7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubp1Q811S7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ubp1Q811S7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubp1Q811S7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubp1Q811S7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Ubp1Q811S7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubp1Q811S7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubp1Q811S7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubp1Q811S7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.01■□□□□ 0.95
Ubp1Q811S7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubp1Q811S7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.01■□□□□ 0.95
Ubp1Q811S7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Ubp1Q811S7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.01■□□□□ 0.95
Ubp1Q811S7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ubp1Q811S7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubp1Q811S7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubp1Q811S7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubp1Q811S7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubp1Q811S7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubp1Q811S7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ubp1Q811S7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Ubp1Q811S7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubp1Q811S7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubp1Q811S7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubp1Q811S7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubp1Q811S7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubp1Q811S7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubp1Q811S7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubp1Q811S7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubp1Q811S7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubp1Q811S7 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.98■□□□□ 0.95
Ubp1Q811S7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubp1Q811S7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms