Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atpaf1Q811I0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Atpaf1Q811I0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Atpaf1Q811I0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atpaf1Q811I0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Atpaf1Q811I0 Gm9397-201ENSMUST00000200125 605 ntBASIC17.52■□□□□ 0.4
Atpaf1Q811I0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atpaf1Q811I0 Iqck-206ENSMUST00000208658 2891 ntBASIC17.52■□□□□ 0.39
Atpaf1Q811I0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atpaf1Q811I0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atpaf1Q811I0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atpaf1Q811I0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atpaf1Q811I0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atpaf1Q811I0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atpaf1Q811I0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Atpaf1Q811I0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atpaf1Q811I0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atpaf1Q811I0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atpaf1Q811I0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atpaf1Q811I0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atpaf1Q811I0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atpaf1Q811I0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atpaf1Q811I0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atpaf1Q811I0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Atpaf1Q811I0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.49■□□□□ 0.39
Atpaf1Q811I0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atpaf1Q811I0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atpaf1Q811I0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atpaf1Q811I0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Atpaf1Q811I0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atpaf1Q811I0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atpaf1Q811I0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Atpaf1Q811I0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atpaf1Q811I0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Atpaf1Q811I0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.46■□□□□ 0.39
Atpaf1Q811I0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Atpaf1Q811I0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Atpaf1Q811I0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atpaf1Q811I0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Atpaf1Q811I0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Atpaf1Q811I0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Gm37136-201ENSMUST00000194368 194 ntBASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atpaf1Q811I0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atpaf1Q811I0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atpaf1Q811I0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atpaf1Q811I0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atpaf1Q811I0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atpaf1Q811I0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atpaf1Q811I0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atpaf1Q811I0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atpaf1Q811I0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atpaf1Q811I0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atpaf1Q811I0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atpaf1Q811I0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atpaf1Q811I0 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.4■□□□□ 0.38
Atpaf1Q811I0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atpaf1Q811I0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms