Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.71■■□□□ 1.55
Prpf40bQ80W14 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Prpf40bQ80W14 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Prpf40bQ80W14 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.7■■□□□ 1.54
Prpf40bQ80W14 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Prpf40bQ80W14 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Prpf40bQ80W14 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Prpf40bQ80W14 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Prpf40bQ80W14 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Prpf40bQ80W14 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Prpf40bQ80W14 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Prpf40bQ80W14 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.68■■□□□ 1.54
Prpf40bQ80W14 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.68■■□□□ 1.54
Prpf40bQ80W14 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Prpf40bQ80W14 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.67■■□□□ 1.54
Prpf40bQ80W14 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Prpf40bQ80W14 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Prpf40bQ80W14 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.66■■□□□ 1.54
Prpf40bQ80W14 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.66■■□□□ 1.54
Prpf40bQ80W14 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Prpf40bQ80W14 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Prpf40bQ80W14 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Prpf40bQ80W14 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
Prpf40bQ80W14 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Prpf40bQ80W14 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Prpf40bQ80W14 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Prpf40bQ80W14 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Prpf40bQ80W14 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Prpf40bQ80W14 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.64■■□□□ 1.54
Prpf40bQ80W14 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.64■■□□□ 1.54
Prpf40bQ80W14 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Prpf40bQ80W14 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Prpf40bQ80W14 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Prpf40bQ80W14 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Prpf40bQ80W14 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.62■■□□□ 1.53
Prpf40bQ80W14 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.62■■□□□ 1.53
Prpf40bQ80W14 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prpf40bQ80W14 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prpf40bQ80W14 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prpf40bQ80W14 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
Prpf40bQ80W14 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Prpf40bQ80W14 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Prpf40bQ80W14 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
Prpf40bQ80W14 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Prpf40bQ80W14 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf40bQ80W14 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.6■■□□□ 1.53
Prpf40bQ80W14 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.6■■□□□ 1.53
Prpf40bQ80W14 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf40bQ80W14 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf40bQ80W14 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf40bQ80W14 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.6■■□□□ 1.53
Prpf40bQ80W14 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prpf40bQ80W14 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Prpf40bQ80W14 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prpf40bQ80W14 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prpf40bQ80W14 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Prpf40bQ80W14 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Prpf40bQ80W14 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Prpf40bQ80W14 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.58■■□□□ 1.53
Prpf40bQ80W14 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Prpf40bQ80W14 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Prpf40bQ80W14 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Prpf40bQ80W14 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.52
Prpf40bQ80W14 Gm12821-201ENSMUST00000120022 600 ntBASIC24.57■■□□□ 1.52
Prpf40bQ80W14 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Prpf40bQ80W14 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Prpf40bQ80W14 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prpf40bQ80W14 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Prpf40bQ80W14 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.56■■□□□ 1.52
Prpf40bQ80W14 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Prpf40bQ80W14 Gm12922-201ENSMUST00000120626 809 ntBASIC24.55■■□□□ 1.52
Prpf40bQ80W14 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prpf40bQ80W14 Gm27454-201ENSMUST00000185090 204 ntBASIC24.55■■□□□ 1.52
Prpf40bQ80W14 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prpf40bQ80W14 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Prpf40bQ80W14 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Prpf40bQ80W14 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Prpf40bQ80W14 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Prpf40bQ80W14 Gm40881-201ENSMUST00000223397 166 ntBASIC24.54■■□□□ 1.52
Prpf40bQ80W14 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Prpf40bQ80W14 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Prpf40bQ80W14 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Prpf40bQ80W14 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms