Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ush1gQ80T11 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ush1gQ80T11 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ush1gQ80T11 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Ush1gQ80T11 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ush1gQ80T11 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Ush1gQ80T11 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ush1gQ80T11 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ush1gQ80T11 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ush1gQ80T11 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ush1gQ80T11 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ush1gQ80T11 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.5■■□□□ 1.35
Ush1gQ80T11 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.49■■□□□ 1.35
Ush1gQ80T11 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ush1gQ80T11 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Ush1gQ80T11 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ush1gQ80T11 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ush1gQ80T11 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.49■■□□□ 1.35
Ush1gQ80T11 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Ush1gQ80T11 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ush1gQ80T11 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ush1gQ80T11 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ush1gQ80T11 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ush1gQ80T11 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ush1gQ80T11 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Ush1gQ80T11 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ush1gQ80T11 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.47■■□□□ 1.35
Ush1gQ80T11 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ush1gQ80T11 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ush1gQ80T11 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.46■■□□□ 1.35
Ush1gQ80T11 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ush1gQ80T11 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.46■■□□□ 1.35
Ush1gQ80T11 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Ush1gQ80T11 Gm9847-201ENSMUST00000052528 599 ntBASIC23.46■■□□□ 1.35
Ush1gQ80T11 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ush1gQ80T11 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Ush1gQ80T11 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ush1gQ80T11 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ush1gQ80T11 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Ush1gQ80T11 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ush1gQ80T11 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ush1gQ80T11 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.45■■□□□ 1.34
Ush1gQ80T11 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.45■■□□□ 1.34
Ush1gQ80T11 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.45■■□□□ 1.34
Ush1gQ80T11 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ush1gQ80T11 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ush1gQ80T11 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ush1gQ80T11 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ush1gQ80T11 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ush1gQ80T11 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ush1gQ80T11 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Ush1gQ80T11 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ush1gQ80T11 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ush1gQ80T11 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ush1gQ80T11 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ush1gQ80T11 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.43■■□□□ 1.34
Ush1gQ80T11 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.43■■□□□ 1.34
Ush1gQ80T11 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
Ush1gQ80T11 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ush1gQ80T11 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ush1gQ80T11 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ush1gQ80T11 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ush1gQ80T11 Gm40881-201ENSMUST00000223397 166 ntBASIC23.42■■□□□ 1.34
Ush1gQ80T11 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ush1gQ80T11 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.42■■□□□ 1.34
Ush1gQ80T11 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ush1gQ80T11 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.41■■□□□ 1.34
Ush1gQ80T11 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Ush1gQ80T11 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ush1gQ80T11 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.41■■□□□ 1.34
Ush1gQ80T11 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ush1gQ80T11 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ush1gQ80T11 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.4■■□□□ 1.34
Ush1gQ80T11 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ush1gQ80T11 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ush1gQ80T11 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ush1gQ80T11 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ush1gQ80T11 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ush1gQ80T11 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Ush1gQ80T11 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ush1gQ80T11 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ush1gQ80T11 Gm22238-201ENSMUST00000175222 88 ntBASIC23.39■■□□□ 1.33
Ush1gQ80T11 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.39■■□□□ 1.33
Ush1gQ80T11 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ush1gQ80T11 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ush1gQ80T11 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ush1gQ80T11 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ush1gQ80T11 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Ush1gQ80T11 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ush1gQ80T11 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Ush1gQ80T11 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ush1gQ80T11 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ush1gQ80T11 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Ush1gQ80T11 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ush1gQ80T11 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ush1gQ80T11 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ush1gQ80T11 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Ush1gQ80T11 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.37■■□□□ 1.33
Ush1gQ80T11 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.37■■□□□ 1.33
Ush1gQ80T11 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms