Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Exosc3Q7TQK4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Exosc3Q7TQK4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Exosc3Q7TQK4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Exosc3Q7TQK4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.78■□□□□ 0.76
Exosc3Q7TQK4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Exosc3Q7TQK4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Exosc3Q7TQK4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Exosc3Q7TQK4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Exosc3Q7TQK4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Exosc3Q7TQK4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Exosc3Q7TQK4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.77■□□□□ 0.76
Exosc3Q7TQK4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Exosc3Q7TQK4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Exosc3Q7TQK4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.77■□□□□ 0.75
Exosc3Q7TQK4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Exosc3Q7TQK4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Exosc3Q7TQK4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.76■□□□□ 0.75
Exosc3Q7TQK4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Exosc3Q7TQK4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Exosc3Q7TQK4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Exosc3Q7TQK4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Exosc3Q7TQK4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Exosc3Q7TQK4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Exosc3Q7TQK4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Exosc3Q7TQK4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Exosc3Q7TQK4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Exosc3Q7TQK4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Exosc3Q7TQK4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Exosc3Q7TQK4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Exosc3Q7TQK4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.71■□□□□ 0.75
Exosc3Q7TQK4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Exosc3Q7TQK4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
Exosc3Q7TQK4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Exosc3Q7TQK4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Exosc3Q7TQK4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Exosc3Q7TQK4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Exosc3Q7TQK4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Exosc3Q7TQK4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Exosc3Q7TQK4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Exosc3Q7TQK4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Exosc3Q7TQK4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Exosc3Q7TQK4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Exosc3Q7TQK4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Exosc3Q7TQK4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Exosc3Q7TQK4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Exosc3Q7TQK4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Exosc3Q7TQK4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Exosc3Q7TQK4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Exosc3Q7TQK4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Exosc3Q7TQK4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Exosc3Q7TQK4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.65■□□□□ 0.74
Exosc3Q7TQK4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.65■□□□□ 0.74
Exosc3Q7TQK4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Exosc3Q7TQK4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Exosc3Q7TQK4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.65■□□□□ 0.74
Exosc3Q7TQK4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms