Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ShprhQ7TPQ3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
ShprhQ7TPQ3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Gm27454-201ENSMUST00000185090 204 ntBASIC31.35■■■□□ 2.61
ShprhQ7TPQ3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
ShprhQ7TPQ3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC31.34■■■□□ 2.61
ShprhQ7TPQ3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ShprhQ7TPQ3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC31.33■■■□□ 2.61
ShprhQ7TPQ3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ShprhQ7TPQ3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ShprhQ7TPQ3 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.32■■■□□ 2.6
ShprhQ7TPQ3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
ShprhQ7TPQ3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC31.32■■■□□ 2.6
ShprhQ7TPQ3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ShprhQ7TPQ3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
ShprhQ7TPQ3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
ShprhQ7TPQ3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ShprhQ7TPQ3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
ShprhQ7TPQ3 Golgb1-201ENSMUST00000023534 498 ntBASIC31.3■■■□□ 2.6
ShprhQ7TPQ3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ShprhQ7TPQ3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ShprhQ7TPQ3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ShprhQ7TPQ3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ShprhQ7TPQ3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ShprhQ7TPQ3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ShprhQ7TPQ3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ShprhQ7TPQ3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ShprhQ7TPQ3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
ShprhQ7TPQ3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
ShprhQ7TPQ3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC31.28■■■□□ 2.6
ShprhQ7TPQ3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ShprhQ7TPQ3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ShprhQ7TPQ3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC31.28■■■□□ 2.6
ShprhQ7TPQ3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
ShprhQ7TPQ3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ShprhQ7TPQ3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ShprhQ7TPQ3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ShprhQ7TPQ3 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.26■■■□□ 2.6
ShprhQ7TPQ3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ShprhQ7TPQ3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC31.25■■■□□ 2.59
ShprhQ7TPQ3 Gm10620-201ENSMUST00000098379 1332 ntBASIC31.25■■■□□ 2.59
ShprhQ7TPQ3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.25■■■□□ 2.59
ShprhQ7TPQ3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
ShprhQ7TPQ3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.24■■■□□ 2.59
ShprhQ7TPQ3 Gm6934-201ENSMUST00000194780 1905 ntBASIC31.24■■■□□ 2.59
ShprhQ7TPQ3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ShprhQ7TPQ3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
ShprhQ7TPQ3 Gm45417-201ENSMUST00000209533 758 ntBASIC31.24■■■□□ 2.59
ShprhQ7TPQ3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ShprhQ7TPQ3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ShprhQ7TPQ3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ShprhQ7TPQ3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ShprhQ7TPQ3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ShprhQ7TPQ3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ShprhQ7TPQ3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ShprhQ7TPQ3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ShprhQ7TPQ3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC31.2■■■□□ 2.59
ShprhQ7TPQ3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
ShprhQ7TPQ3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ShprhQ7TPQ3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
ShprhQ7TPQ3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC31.19■■■□□ 2.58
ShprhQ7TPQ3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
ShprhQ7TPQ3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ShprhQ7TPQ3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ShprhQ7TPQ3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ShprhQ7TPQ3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ShprhQ7TPQ3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ShprhQ7TPQ3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ShprhQ7TPQ3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ShprhQ7TPQ3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ShprhQ7TPQ3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ShprhQ7TPQ3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC31.17■■■□□ 2.58
ShprhQ7TPQ3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ShprhQ7TPQ3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
ShprhQ7TPQ3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC31.16■■■□□ 2.58
ShprhQ7TPQ3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ShprhQ7TPQ3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC31.15■■■□□ 2.58
ShprhQ7TPQ3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ShprhQ7TPQ3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
ShprhQ7TPQ3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC31.14■■■□□ 2.58
ShprhQ7TPQ3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ShprhQ7TPQ3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ShprhQ7TPQ3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.14■■■□□ 2.58
ShprhQ7TPQ3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ShprhQ7TPQ3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms