Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.43■□□□□ 0.38
Vma21Q78T54 Gm44428-201ENSMUST00000204474 874 ntBASIC17.43■□□□□ 0.38
Vma21Q78T54 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vma21Q78T54 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.43■□□□□ 0.38
Vma21Q78T54 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vma21Q78T54 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.43■□□□□ 0.38
Vma21Q78T54 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vma21Q78T54 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.42■□□□□ 0.38
Vma21Q78T54 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vma21Q78T54 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vma21Q78T54 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vma21Q78T54 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vma21Q78T54 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vma21Q78T54 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vma21Q78T54 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.41■□□□□ 0.38
Vma21Q78T54 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vma21Q78T54 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
Vma21Q78T54 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.4■□□□□ 0.38
Vma21Q78T54 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vma21Q78T54 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Vma21Q78T54 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vma21Q78T54 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vma21Q78T54 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Vma21Q78T54 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vma21Q78T54 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vma21Q78T54 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vma21Q78T54 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Vma21Q78T54 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vma21Q78T54 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.39■□□□□ 0.37
Vma21Q78T54 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.39■□□□□ 0.37
Vma21Q78T54 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vma21Q78T54 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vma21Q78T54 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.39■□□□□ 0.37
Vma21Q78T54 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vma21Q78T54 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vma21Q78T54 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vma21Q78T54 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vma21Q78T54 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vma21Q78T54 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vma21Q78T54 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.38■□□□□ 0.37
Vma21Q78T54 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vma21Q78T54 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vma21Q78T54 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vma21Q78T54 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Vma21Q78T54 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vma21Q78T54 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vma21Q78T54 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.37■□□□□ 0.37
Vma21Q78T54 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vma21Q78T54 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vma21Q78T54 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vma21Q78T54 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vma21Q78T54 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.37■□□□□ 0.37
Vma21Q78T54 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Vma21Q78T54 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vma21Q78T54 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.37■□□□□ 0.37
Vma21Q78T54 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vma21Q78T54 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vma21Q78T54 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vma21Q78T54 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.36■□□□□ 0.37
Vma21Q78T54 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vma21Q78T54 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vma21Q78T54 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vma21Q78T54 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vma21Q78T54 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Vma21Q78T54 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.35■□□□□ 0.37
Vma21Q78T54 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vma21Q78T54 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
Vma21Q78T54 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vma21Q78T54 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vma21Q78T54 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Vma21Q78T54 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vma21Q78T54 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vma21Q78T54 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vma21Q78T54 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Vma21Q78T54 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vma21Q78T54 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vma21Q78T54 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vma21Q78T54 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vma21Q78T54 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vma21Q78T54 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vma21Q78T54 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms