Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.93■■□□□ 1.74
Npc1l1Q6T3U4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Npc1l1Q6T3U4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Npc1l1Q6T3U4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Npc1l1Q6T3U4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms