Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Npc1l1Q6T3U4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.93■■□□□ 1.74
Npc1l1Q6T3U4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Npc1l1Q6T3U4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Npc1l1Q6T3U4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Npc1l1Q6T3U4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Npc1l1Q6T3U4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Npc1l1Q6T3U4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Npc1l1Q6T3U4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Npc1l1Q6T3U4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Npc1l1Q6T3U4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Npc1l1Q6T3U4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.86■■□□□ 1.73
Npc1l1Q6T3U4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.85■■□□□ 1.73
Npc1l1Q6T3U4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.84■■□□□ 1.73
Npc1l1Q6T3U4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Npc1l1Q6T3U4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Npc1l1Q6T3U4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Npc1l1Q6T3U4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.81■■□□□ 1.72
Npc1l1Q6T3U4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms