Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim45Q6PFY8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim45Q6PFY8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim45Q6PFY8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim45Q6PFY8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim45Q6PFY8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim45Q6PFY8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Trim45Q6PFY8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim45Q6PFY8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim45Q6PFY8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim45Q6PFY8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim45Q6PFY8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim45Q6PFY8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim45Q6PFY8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim45Q6PFY8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Trim45Q6PFY8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Trim45Q6PFY8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.14■□□□□ 0.81
Trim45Q6PFY8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim45Q6PFY8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.12■□□□□ 0.81
Trim45Q6PFY8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim45Q6PFY8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim45Q6PFY8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim45Q6PFY8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Trim45Q6PFY8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim45Q6PFY8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
Trim45Q6PFY8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim45Q6PFY8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim45Q6PFY8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim45Q6PFY8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim45Q6PFY8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim45Q6PFY8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim45Q6PFY8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim45Q6PFY8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.09■□□□□ 0.81
Trim45Q6PFY8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim45Q6PFY8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim45Q6PFY8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim45Q6PFY8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim45Q6PFY8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim45Q6PFY8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim45Q6PFY8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Trim45Q6PFY8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim45Q6PFY8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim45Q6PFY8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim45Q6PFY8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim45Q6PFY8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim45Q6PFY8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim45Q6PFY8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim45Q6PFY8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.05■□□□□ 0.8
Trim45Q6PFY8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms