Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd3Q6P9Z1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Smarcd3Q6P9Z1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcd3Q6P9Z1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.58■□□□□ 0.72
Smarcd3Q6P9Z1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd3Q6P9Z1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd3Q6P9Z1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd3Q6P9Z1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Smarcd3Q6P9Z1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smarcd3Q6P9Z1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd3Q6P9Z1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Smarcd3Q6P9Z1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd3Q6P9Z1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd3Q6P9Z1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd3Q6P9Z1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd3Q6P9Z1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcd3Q6P9Z1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcd3Q6P9Z1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd3Q6P9Z1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd3Q6P9Z1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd3Q6P9Z1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smarcd3Q6P9Z1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd3Q6P9Z1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcd3Q6P9Z1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smarcd3Q6P9Z1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.53■□□□□ 0.72
Smarcd3Q6P9Z1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.53■□□□□ 0.72
Smarcd3Q6P9Z1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd3Q6P9Z1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd3Q6P9Z1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd3Q6P9Z1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd3Q6P9Z1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd3Q6P9Z1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.52■□□□□ 0.72
Smarcd3Q6P9Z1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Smarcd3Q6P9Z1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Smarcd3Q6P9Z1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd3Q6P9Z1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcd3Q6P9Z1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Smarcd3Q6P9Z1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd3Q6P9Z1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd3Q6P9Z1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd3Q6P9Z1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd3Q6P9Z1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd3Q6P9Z1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd3Q6P9Z1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd3Q6P9Z1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd3Q6P9Z1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms