Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Abcf1Q6P542 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.89■■□□□ 1.42
Abcf1Q6P542 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Abcf1Q6P542 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Abcf1Q6P542 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Abcf1Q6P542 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Abcf1Q6P542 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Abcf1Q6P542 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Abcf1Q6P542 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Abcf1Q6P542 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Abcf1Q6P542 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Abcf1Q6P542 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.87■■□□□ 1.41
Abcf1Q6P542 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.87■■□□□ 1.41
Abcf1Q6P542 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abcf1Q6P542 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Abcf1Q6P542 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Abcf1Q6P542 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.86■■□□□ 1.41
Abcf1Q6P542 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.86■■□□□ 1.41
Abcf1Q6P542 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.86■■□□□ 1.41
Abcf1Q6P542 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Abcf1Q6P542 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Abcf1Q6P542 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Abcf1Q6P542 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Abcf1Q6P542 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Abcf1Q6P542 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Abcf1Q6P542 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Abcf1Q6P542 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Abcf1Q6P542 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Abcf1Q6P542 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Abcf1Q6P542 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Abcf1Q6P542 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.84■■□□□ 1.41
Abcf1Q6P542 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Abcf1Q6P542 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.83■■□□□ 1.41
Abcf1Q6P542 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Abcf1Q6P542 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Abcf1Q6P542 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Abcf1Q6P542 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Abcf1Q6P542 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.82■■□□□ 1.4
Abcf1Q6P542 Gm12366-201ENSMUST00000121722 873 ntBASIC23.82■■□□□ 1.4
Abcf1Q6P542 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.82■■□□□ 1.4
Abcf1Q6P542 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Abcf1Q6P542 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.82■■□□□ 1.4
Abcf1Q6P542 Gm5786-201ENSMUST00000085368 882 ntBASIC23.82■■□□□ 1.4
Abcf1Q6P542 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Abcf1Q6P542 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
Abcf1Q6P542 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Abcf1Q6P542 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Abcf1Q6P542 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Abcf1Q6P542 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Abcf1Q6P542 Gm27502-201ENSMUST00000183495 199 ntBASIC23.8■■□□□ 1.4
Abcf1Q6P542 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Abcf1Q6P542 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Abcf1Q6P542 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Abcf1Q6P542 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Abcf1Q6P542 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Abcf1Q6P542 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.79■■□□□ 1.4
Abcf1Q6P542 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Abcf1Q6P542 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Abcf1Q6P542 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
Abcf1Q6P542 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Abcf1Q6P542 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abcf1Q6P542 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abcf1Q6P542 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abcf1Q6P542 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abcf1Q6P542 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Abcf1Q6P542 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abcf1Q6P542 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.77■■□□□ 1.4
Abcf1Q6P542 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.77■■□□□ 1.4
Abcf1Q6P542 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 196.6 ms