Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm27502-201ENSMUST00000183495 199 ntBASIC20.95■□□□□ 0.94
Six3Q62233 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Six3Q62233 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Six3Q62233 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Six3Q62233 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six3Q62233 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.94■□□□□ 0.94
Six3Q62233 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Six3Q62233 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six3Q62233 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six3Q62233 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six3Q62233 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Six3Q62233 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Six3Q62233 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Six3Q62233 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six3Q62233 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six3Q62233 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.92■□□□□ 0.94
Six3Q62233 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six3Q62233 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Six3Q62233 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.91■□□□□ 0.94
Six3Q62233 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Six3Q62233 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six3Q62233 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six3Q62233 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six3Q62233 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six3Q62233 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six3Q62233 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Six3Q62233 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Six3Q62233 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six3Q62233 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six3Q62233 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six3Q62233 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.89■□□□□ 0.94
Six3Q62233 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Six3Q62233 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.89■□□□□ 0.93
Six3Q62233 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.89■□□□□ 0.93
Six3Q62233 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Six3Q62233 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Six3Q62233 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Six3Q62233 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
Six3Q62233 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Six3Q62233 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six3Q62233 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six3Q62233 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six3Q62233 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Six3Q62233 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.88■□□□□ 0.93
Six3Q62233 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Six3Q62233 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Six3Q62233 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
Six3Q62233 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six3Q62233 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six3Q62233 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.87■□□□□ 0.93
Six3Q62233 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six3Q62233 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Six3Q62233 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Six3Q62233 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Six3Q62233 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six3Q62233 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Six3Q62233 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Six3Q62233 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Six3Q62233 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.86■□□□□ 0.93
Six3Q62233 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.86■□□□□ 0.93
Six3Q62233 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Six3Q62233 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Six3Q62233 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Six3Q62233 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.85■□□□□ 0.93
Six3Q62233 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Six3Q62233 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.85■□□□□ 0.93
Six3Q62233 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Six3Q62233 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Six3Q62233 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Six3Q62233 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Six3Q62233 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Six3Q62233 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.83■□□□□ 0.93
Six3Q62233 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Six3Q62233 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Six3Q62233 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Six3Q62233 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Six3Q62233 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms