Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.42■□□□□ 0.7
Cd47Q61735 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd47Q61735 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd47Q61735 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.41■□□□□ 0.7
Cd47Q61735 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd47Q61735 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cd47Q61735 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Cd47Q61735 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd47Q61735 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd47Q61735 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cd47Q61735 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd47Q61735 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd47Q61735 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd47Q61735 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.4■□□□□ 0.7
Cd47Q61735 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd47Q61735 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd47Q61735 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd47Q61735 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.39■□□□□ 0.7
Cd47Q61735 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd47Q61735 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd47Q61735 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd47Q61735 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cd47Q61735 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd47Q61735 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.38■□□□□ 0.69
Cd47Q61735 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd47Q61735 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cd47Q61735 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd47Q61735 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.37■□□□□ 0.69
Cd47Q61735 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.37■□□□□ 0.69
Cd47Q61735 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd47Q61735 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd47Q61735 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd47Q61735 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd47Q61735 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cd47Q61735 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd47Q61735 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.36■□□□□ 0.69
Cd47Q61735 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd47Q61735 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd47Q61735 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cd47Q61735 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.35■□□□□ 0.69
Cd47Q61735 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cd47Q61735 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cd47Q61735 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Cd47Q61735 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd47Q61735 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd47Q61735 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd47Q61735 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd47Q61735 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd47Q61735 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cd47Q61735 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.34■□□□□ 0.69
Cd47Q61735 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cd47Q61735 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd47Q61735 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd47Q61735 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cd47Q61735 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd47Q61735 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.33■□□□□ 0.69
Cd47Q61735 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.33■□□□□ 0.69
Cd47Q61735 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cd47Q61735 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd47Q61735 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd47Q61735 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cd47Q61735 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd47Q61735 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cd47Q61735 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.33■□□□□ 0.68
Cd47Q61735 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd47Q61735 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd47Q61735 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd47Q61735 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd47Q61735 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cd47Q61735 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd47Q61735 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.32■□□□□ 0.68
Cd47Q61735 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd47Q61735 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd47Q61735 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cd47Q61735 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd47Q61735 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd47Q61735 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd47Q61735 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cd47Q61735 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd47Q61735 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd47Q61735 Gm11175-201ENSMUST00000116172 543 ntBASIC19.3■□□□□ 0.68
Cd47Q61735 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd47Q61735 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cd47Q61735 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms