Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Foxf1Q61080 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Foxf1Q61080 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Foxf1Q61080 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Foxf1Q61080 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Foxf1Q61080 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxf1Q61080 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxf1Q61080 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Foxf1Q61080 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Foxf1Q61080 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Foxf1Q61080 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.95■□□□□ 0.46
Foxf1Q61080 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxf1Q61080 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxf1Q61080 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Foxf1Q61080 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxf1Q61080 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxf1Q61080 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxf1Q61080 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Foxf1Q61080 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxf1Q61080 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Foxf1Q61080 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxf1Q61080 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Foxf1Q61080 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxf1Q61080 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxf1Q61080 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Foxf1Q61080 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Foxf1Q61080 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxf1Q61080 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Foxf1Q61080 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxf1Q61080 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxf1Q61080 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Foxf1Q61080 Cap2-205ENSMUST00000225824 1634 ntBASIC17.91■□□□□ 0.46
Foxf1Q61080 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxf1Q61080 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Foxf1Q61080 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Foxf1Q61080 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxf1Q61080 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxf1Q61080 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.91■□□□□ 0.46
Foxf1Q61080 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxf1Q61080 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxf1Q61080 Gm10420-201ENSMUST00000121713 882 ntBASIC17.9■□□□□ 0.46
Foxf1Q61080 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxf1Q61080 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxf1Q61080 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.9■□□□□ 0.46
Foxf1Q61080 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxf1Q61080 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxf1Q61080 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Foxf1Q61080 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Foxf1Q61080 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.89■□□□□ 0.45
Foxf1Q61080 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.89■□□□□ 0.45
Foxf1Q61080 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.89■□□□□ 0.45
Foxf1Q61080 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.89■□□□□ 0.45
Foxf1Q61080 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.89■□□□□ 0.45
Foxf1Q61080 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxf1Q61080 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxf1Q61080 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxf1Q61080 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxf1Q61080 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxf1Q61080 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxf1Q61080 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxf1Q61080 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxf1Q61080 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxf1Q61080 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxf1Q61080 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.87■□□□□ 0.45
Foxf1Q61080 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.87■□□□□ 0.45
Foxf1Q61080 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxf1Q61080 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.87■□□□□ 0.45
Foxf1Q61080 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxf1Q61080 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxf1Q61080 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxf1Q61080 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxf1Q61080 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Foxf1Q61080 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxf1Q61080 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxf1Q61080 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxf1Q61080 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Foxf1Q61080 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxf1Q61080 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxf1Q61080 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Foxf1Q61080 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxf1Q61080 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxf1Q61080 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Foxf1Q61080 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Foxf1Q61080 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxf1Q61080 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Foxf1Q61080 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Foxf1Q61080 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.84■□□□□ 0.45
Foxf1Q61080 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Foxf1Q61080 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Foxf1Q61080 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Foxf1Q61080 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Foxf1Q61080 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Foxf1Q61080 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms