Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr3Q5U430 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr3Q5U430 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr3Q5U430 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr3Q5U430 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr3Q5U430 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Ubr3Q5U430 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr3Q5U430 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr3Q5U430 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr3Q5U430 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr3Q5U430 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.93■■□□□ 1.9
Ubr3Q5U430 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ubr3Q5U430 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC26.93■■□□□ 1.9
Ubr3Q5U430 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ubr3Q5U430 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.93■■□□□ 1.9
Ubr3Q5U430 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ubr3Q5U430 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Ubr3Q5U430 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Ubr3Q5U430 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ubr3Q5U430 Gm2011-201ENSMUST00000203124 1263 ntBASIC26.92■■□□□ 1.9
Ubr3Q5U430 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr3Q5U430 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr3Q5U430 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr3Q5U430 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr3Q5U430 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr3Q5U430 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ubr3Q5U430 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC26.91■■□□□ 1.9
Ubr3Q5U430 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Ubr3Q5U430 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
Ubr3Q5U430 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Ubr3Q5U430 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.9■■□□□ 1.9
Ubr3Q5U430 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ubr3Q5U430 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ubr3Q5U430 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.89■■□□□ 1.89
Ubr3Q5U430 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ubr3Q5U430 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ubr3Q5U430 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.89■■□□□ 1.89
Ubr3Q5U430 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr3Q5U430 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr3Q5U430 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr3Q5U430 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr3Q5U430 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr3Q5U430 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26.87■■□□□ 1.89
Ubr3Q5U430 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr3Q5U430 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.87■■□□□ 1.89
Ubr3Q5U430 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr3Q5U430 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr3Q5U430 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Ubr3Q5U430 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr3Q5U430 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC26.86■■□□□ 1.89
Ubr3Q5U430 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.86■■□□□ 1.89
Ubr3Q5U430 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr3Q5U430 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr3Q5U430 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC26.85■■□□□ 1.89
Ubr3Q5U430 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ubr3Q5U430 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC26.85■■□□□ 1.89
Ubr3Q5U430 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ubr3Q5U430 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ubr3Q5U430 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.84■■□□□ 1.89
Ubr3Q5U430 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ubr3Q5U430 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ubr3Q5U430 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
Ubr3Q5U430 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.83■■□□□ 1.89
Ubr3Q5U430 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ubr3Q5U430 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ubr3Q5U430 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ubr3Q5U430 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.83■■□□□ 1.88
Ubr3Q5U430 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Ubr3Q5U430 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ubr3Q5U430 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.82■■□□□ 1.88
Ubr3Q5U430 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ubr3Q5U430 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ubr3Q5U430 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Ubr3Q5U430 Gm8495-201ENSMUST00000188740 694 ntBASIC26.82■■□□□ 1.88
Ubr3Q5U430 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ubr3Q5U430 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ubr3Q5U430 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ubr3Q5U430 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.81■■□□□ 1.88
Ubr3Q5U430 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ubr3Q5U430 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.81■■□□□ 1.88
Ubr3Q5U430 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC26.81■■□□□ 1.88
Ubr3Q5U430 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ubr3Q5U430 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.81■■□□□ 1.88
Ubr3Q5U430 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Ubr3Q5U430 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ubr3Q5U430 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ubr3Q5U430 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ubr3Q5U430 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ubr3Q5U430 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ubr3Q5U430 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC26.79■■□□□ 1.88
Ubr3Q5U430 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Ubr3Q5U430 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ubr3Q5U430 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ubr3Q5U430 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.79■■□□□ 1.88
Ubr3Q5U430 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ubr3Q5U430 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC26.78■■□□□ 1.88
Ubr3Q5U430 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ubr3Q5U430 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ubr3Q5U430 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ubr3Q5U430 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms