Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav7-2Q5R1I3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7-2Q5R1I3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7-2Q5R1I3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav7-2Q5R1I3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7-2Q5R1I3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7-2Q5R1I3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7-2Q5R1I3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav7-2Q5R1I3 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-2Q5R1I3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav7-2Q5R1I3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7-2Q5R1I3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7-2Q5R1I3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7-2Q5R1I3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7-2Q5R1I3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7-2Q5R1I3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-2Q5R1I3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-2Q5R1I3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav7-2Q5R1I3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-2Q5R1I3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-2Q5R1I3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-2Q5R1I3 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.76■□□□□ 0.11
Trav7-2Q5R1I3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-2Q5R1I3 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-2Q5R1I3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-2Q5R1I3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Gm14523-201ENSMUST00000117260 558 ntBASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-2Q5R1I3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-2Q5R1I3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms