Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-1Q5R1H8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Trav8d-1Q5R1H8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-1Q5R1H8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Trav8d-1Q5R1H8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav8d-1Q5R1H8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav8d-1Q5R1H8 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.39■□□□□ 0.38
Trav8d-1Q5R1H8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav8d-1Q5R1H8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav8d-1Q5R1H8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav8d-1Q5R1H8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav8d-1Q5R1H8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8d-1Q5R1H8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8d-1Q5R1H8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8d-1Q5R1H8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8d-1Q5R1H8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav8d-1Q5R1H8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8d-1Q5R1H8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8d-1Q5R1H8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav8d-1Q5R1H8 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.37■□□□□ 0.37
Trav8d-1Q5R1H8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.37■□□□□ 0.37
Trav8d-1Q5R1H8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav8d-1Q5R1H8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav8d-1Q5R1H8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav8d-1Q5R1H8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav8d-1Q5R1H8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav8d-1Q5R1H8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav8d-1Q5R1H8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-1Q5R1H8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav8d-1Q5R1H8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-1Q5R1H8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav8d-1Q5R1H8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-1Q5R1H8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav8d-1Q5R1H8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav8d-1Q5R1H8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.31■□□□□ 0.36
Trav8d-1Q5R1H8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms