Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smcr8Q3UMB5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.05■■□□□ 1.28
Smcr8Q3UMB5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.05■■□□□ 1.28
Smcr8Q3UMB5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Smcr8Q3UMB5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smcr8Q3UMB5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Smcr8Q3UMB5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smcr8Q3UMB5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smcr8Q3UMB5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smcr8Q3UMB5 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.02■■□□□ 1.28
Smcr8Q3UMB5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.02■■□□□ 1.28
Smcr8Q3UMB5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smcr8Q3UMB5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.01■■□□□ 1.27
Smcr8Q3UMB5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smcr8Q3UMB5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Smcr8Q3UMB5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.01■■□□□ 1.27
Smcr8Q3UMB5 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.01■■□□□ 1.27
Smcr8Q3UMB5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smcr8Q3UMB5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smcr8Q3UMB5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smcr8Q3UMB5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smcr8Q3UMB5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smcr8Q3UMB5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smcr8Q3UMB5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.99■■□□□ 1.27
Smcr8Q3UMB5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smcr8Q3UMB5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.98■■□□□ 1.27
Smcr8Q3UMB5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Smcr8Q3UMB5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.98■■□□□ 1.27
Smcr8Q3UMB5 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.98■■□□□ 1.27
Smcr8Q3UMB5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Smcr8Q3UMB5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Smcr8Q3UMB5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Smcr8Q3UMB5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.97■■□□□ 1.27
Smcr8Q3UMB5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Smcr8Q3UMB5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smcr8Q3UMB5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Smcr8Q3UMB5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.97■■□□□ 1.27
Smcr8Q3UMB5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Smcr8Q3UMB5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Smcr8Q3UMB5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.96■■□□□ 1.27
Smcr8Q3UMB5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smcr8Q3UMB5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smcr8Q3UMB5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smcr8Q3UMB5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.95■■□□□ 1.26
Smcr8Q3UMB5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.95■■□□□ 1.26
Smcr8Q3UMB5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smcr8Q3UMB5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Gm7417-201ENSMUST00000192950 473 ntBASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smcr8Q3UMB5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smcr8Q3UMB5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Smcr8Q3UMB5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.93■■□□□ 1.26
Smcr8Q3UMB5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Smcr8Q3UMB5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Smcr8Q3UMB5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Smcr8Q3UMB5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Smcr8Q3UMB5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Smcr8Q3UMB5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smcr8Q3UMB5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.91■■□□□ 1.26
Smcr8Q3UMB5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.91■■□□□ 1.26
Smcr8Q3UMB5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smcr8Q3UMB5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smcr8Q3UMB5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smcr8Q3UMB5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Smcr8Q3UMB5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Smcr8Q3UMB5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.89■■□□□ 1.26
Smcr8Q3UMB5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.89■■□□□ 1.25
Smcr8Q3UMB5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Smcr8Q3UMB5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms