Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnrc6aQ3UHK8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.19■□□□□ 0.82
Tnrc6aQ3UHK8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Tnrc6aQ3UHK8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnrc6aQ3UHK8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Gm13241-201ENSMUST00000094493 780 ntBASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Gm10399-202ENSMUST00000202768 748 ntBASIC20.18■□□□□ 0.82
Tnrc6aQ3UHK8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tnrc6aQ3UHK8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Gm12922-201ENSMUST00000120626 809 ntBASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Gm40881-201ENSMUST00000223397 166 ntBASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Tnrc6aQ3UHK8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6aQ3UHK8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.15■□□□□ 0.82
Tnrc6aQ3UHK8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.15■□□□□ 0.82
Tnrc6aQ3UHK8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tnrc6aQ3UHK8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.14■□□□□ 0.81
Tnrc6aQ3UHK8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6aQ3UHK8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6aQ3UHK8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Tnrc6aQ3UHK8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6aQ3UHK8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6aQ3UHK8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6aQ3UHK8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.12■□□□□ 0.81
Tnrc6aQ3UHK8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6aQ3UHK8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6aQ3UHK8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.11■□□□□ 0.81
Tnrc6aQ3UHK8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc6aQ3UHK8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc6aQ3UHK8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Tnrc6aQ3UHK8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc6aQ3UHK8 Gm9847-201ENSMUST00000052528 599 ntBASIC20.11■□□□□ 0.81
Tnrc6aQ3UHK8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc6aQ3UHK8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc6aQ3UHK8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Tnrc6aQ3UHK8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.08■□□□□ 0.81
Tnrc6aQ3UHK8 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.08■□□□□ 0.81
Tnrc6aQ3UHK8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tnrc6aQ3UHK8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnrc6aQ3UHK8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnrc6aQ3UHK8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc6aQ3UHK8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc6aQ3UHK8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.07■□□□□ 0.8
Tnrc6aQ3UHK8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.07■□□□□ 0.8
Tnrc6aQ3UHK8 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.07■□□□□ 0.8
Tnrc6aQ3UHK8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnrc6aQ3UHK8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnrc6aQ3UHK8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnrc6aQ3UHK8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.06■□□□□ 0.8
Tnrc6aQ3UHK8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnrc6aQ3UHK8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnrc6aQ3UHK8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnrc6aQ3UHK8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms