Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrc28Q3TX51 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrc28Q3TX51 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrrc28Q3TX51 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Lrrc28Q3TX51 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.36■□□□□ 0.85
Lrrc28Q3TX51 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lrrc28Q3TX51 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.36■□□□□ 0.85
Lrrc28Q3TX51 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrrc28Q3TX51 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lrrc28Q3TX51 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrc28Q3TX51 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrc28Q3TX51 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrc28Q3TX51 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrc28Q3TX51 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrc28Q3TX51 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrc28Q3TX51 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrrc28Q3TX51 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrrc28Q3TX51 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrrc28Q3TX51 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrc28Q3TX51 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrrc28Q3TX51 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrc28Q3TX51 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Lrrc28Q3TX51 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc28Q3TX51 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lrrc28Q3TX51 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.28■□□□□ 0.84
Lrrc28Q3TX51 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Lrrc28Q3TX51 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc28Q3TX51 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc28Q3TX51 Gm7417-201ENSMUST00000192950 473 ntBASIC20.27■□□□□ 0.84
Lrrc28Q3TX51 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.27■□□□□ 0.84
Lrrc28Q3TX51 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lrrc28Q3TX51 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lrrc28Q3TX51 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc28Q3TX51 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc28Q3TX51 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc28Q3TX51 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.26■□□□□ 0.83
Lrrc28Q3TX51 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.26■□□□□ 0.83
Lrrc28Q3TX51 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.26■□□□□ 0.83
Lrrc28Q3TX51 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc28Q3TX51 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc28Q3TX51 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc28Q3TX51 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.25■□□□□ 0.83
Lrrc28Q3TX51 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc28Q3TX51 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc28Q3TX51 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.25■□□□□ 0.83
Lrrc28Q3TX51 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.24■□□□□ 0.83
Lrrc28Q3TX51 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms