Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fndc4Q3TR08 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fndc4Q3TR08 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fndc4Q3TR08 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fndc4Q3TR08 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Fndc4Q3TR08 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fndc4Q3TR08 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.13■□□□□ 0.49
Fndc4Q3TR08 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Fndc4Q3TR08 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fndc4Q3TR08 Scarna2-201ENSMUST00000157560 414 ntBASIC18.12■□□□□ 0.49
Fndc4Q3TR08 Gm9806-201ENSMUST00000051080 552 ntBASIC18.12■□□□□ 0.49
Fndc4Q3TR08 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fndc4Q3TR08 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fndc4Q3TR08 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fndc4Q3TR08 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Fndc4Q3TR08 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fndc4Q3TR08 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fndc4Q3TR08 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Fndc4Q3TR08 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.11■□□□□ 0.49
Fndc4Q3TR08 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fndc4Q3TR08 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fndc4Q3TR08 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fndc4Q3TR08 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fndc4Q3TR08 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fndc4Q3TR08 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fndc4Q3TR08 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fndc4Q3TR08 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fndc4Q3TR08 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fndc4Q3TR08 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Fndc4Q3TR08 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fndc4Q3TR08 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fndc4Q3TR08 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fndc4Q3TR08 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Fndc4Q3TR08 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fndc4Q3TR08 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Fndc4Q3TR08 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fndc4Q3TR08 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Gm11687-201ENSMUST00000118911 886 ntBASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fndc4Q3TR08 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fndc4Q3TR08 Gm16437-201ENSMUST00000025669 507 ntBASIC18.06■□□□□ 0.48
Fndc4Q3TR08 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fndc4Q3TR08 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.06■□□□□ 0.48
Fndc4Q3TR08 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.06■□□□□ 0.48
Fndc4Q3TR08 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.06■□□□□ 0.48
Fndc4Q3TR08 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fndc4Q3TR08 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fndc4Q3TR08 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Fndc4Q3TR08 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fndc4Q3TR08 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fndc4Q3TR08 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fndc4Q3TR08 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fndc4Q3TR08 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms