Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pkd1l3Q2EG98 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pkd1l3Q2EG98 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Etf1-202ENSMUST00000180351 108 ntBASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.29■□□□□ 0.68
Pkd1l3Q2EG98 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1l3Q2EG98 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 Gm15039-201ENSMUST00000118914 875 ntBASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.27■□□□□ 0.68
Pkd1l3Q2EG98 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pkd1l3Q2EG98 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pkd1l3Q2EG98 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 Gm7417-201ENSMUST00000192950 473 ntBASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.26■□□□□ 0.67
Pkd1l3Q2EG98 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pkd1l3Q2EG98 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pkd1l3Q2EG98 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.25■□□□□ 0.67
Pkd1l3Q2EG98 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pkd1l3Q2EG98 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pkd1l3Q2EG98 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pkd1l3Q2EG98 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Gm10399-202ENSMUST00000202768 748 ntBASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pkd1l3Q2EG98 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pkd1l3Q2EG98 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pkd1l3Q2EG98 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
Pkd1l3Q2EG98 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pkd1l3Q2EG98 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pkd1l3Q2EG98 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pkd1l3Q2EG98 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pkd1l3Q2EG98 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms