Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chd8Q09XV5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Chd8Q09XV5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd8Q09XV5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd8Q09XV5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd8Q09XV5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chd8Q09XV5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd8Q09XV5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd8Q09XV5 Gm22240-201ENSMUST00000175225 82 ntBASIC20.01■□□□□ 0.79
Chd8Q09XV5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd8Q09XV5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd8Q09XV5 Gm43137-201ENSMUST00000198052 594 ntBASIC20■□□□□ 0.79
Chd8Q09XV5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20■□□□□ 0.79
Chd8Q09XV5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20■□□□□ 0.79
Chd8Q09XV5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd8Q09XV5 Gm10602-201ENSMUST00000098239 609 ntBASIC20■□□□□ 0.79
Chd8Q09XV5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd8Q09XV5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chd8Q09XV5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.99■□□□□ 0.79
Chd8Q09XV5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chd8Q09XV5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chd8Q09XV5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd8Q09XV5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd8Q09XV5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.98■□□□□ 0.79
Chd8Q09XV5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd8Q09XV5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Chd8Q09XV5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd8Q09XV5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd8Q09XV5 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.96■□□□□ 0.79
Chd8Q09XV5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chd8Q09XV5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.96■□□□□ 0.79
Chd8Q09XV5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.95■□□□□ 0.78
Chd8Q09XV5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd8Q09XV5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd8Q09XV5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd8Q09XV5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Gm12933-201ENSMUST00000120203 872 ntBASIC19.93■□□□□ 0.78
Chd8Q09XV5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd8Q09XV5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chd8Q09XV5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd8Q09XV5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd8Q09XV5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.91■□□□□ 0.78
Chd8Q09XV5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.91■□□□□ 0.78
Chd8Q09XV5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd8Q09XV5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd8Q09XV5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.91■□□□□ 0.78
Chd8Q09XV5 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.9■□□□□ 0.78
Chd8Q09XV5 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.9■□□□□ 0.78
Chd8Q09XV5 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.9■□□□□ 0.78
Chd8Q09XV5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.9■□□□□ 0.78
Chd8Q09XV5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.9■□□□□ 0.78
Chd8Q09XV5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd8Q09XV5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd8Q09XV5 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.89■□□□□ 0.77
Chd8Q09XV5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd8Q09XV5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd8Q09XV5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd8Q09XV5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd8Q09XV5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd8Q09XV5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Chd8Q09XV5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd8Q09XV5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chd8Q09XV5 Gm43173-201ENSMUST00000202246 593 ntBASIC19.88■□□□□ 0.77
Chd8Q09XV5 AV356131-201ENSMUST00000206201 750 ntBASIC19.88■□□□□ 0.77
Chd8Q09XV5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd8Q09XV5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd8Q09XV5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.88■□□□□ 0.77
Chd8Q09XV5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Chd8Q09XV5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd8Q09XV5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.87■□□□□ 0.77
Chd8Q09XV5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.87■□□□□ 0.77
Chd8Q09XV5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd8Q09XV5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Chd8Q09XV5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chd8Q09XV5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms