Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tff1Q08423 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff1Q08423 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.69■□□□□ 0.42
Tff1Q08423 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.69■□□□□ 0.42
Tff1Q08423 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff1Q08423 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff1Q08423 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tff1Q08423 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tff1Q08423 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.68■□□□□ 0.42
Tff1Q08423 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tff1Q08423 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tff1Q08423 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tff1Q08423 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tff1Q08423 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tff1Q08423 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Tff1Q08423 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tff1Q08423 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.67■□□□□ 0.42
Tff1Q08423 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tff1Q08423 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tff1Q08423 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.67■□□□□ 0.42
Tff1Q08423 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tff1Q08423 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tff1Q08423 Gm14523-201ENSMUST00000117260 558 ntBASIC17.66■□□□□ 0.42
Tff1Q08423 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tff1Q08423 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tff1Q08423 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tff1Q08423 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tff1Q08423 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff1Q08423 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff1Q08423 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff1Q08423 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tff1Q08423 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Tff1Q08423 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.65■□□□□ 0.42
Tff1Q08423 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tff1Q08423 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Tff1Q08423 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tff1Q08423 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tff1Q08423 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tff1Q08423 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tff1Q08423 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tff1Q08423 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tff1Q08423 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.63■□□□□ 0.41
Tff1Q08423 Gm22567-201ENSMUST00000175542 342 ntBASIC17.63■□□□□ 0.41
Tff1Q08423 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.63■□□□□ 0.41
Tff1Q08423 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tff1Q08423 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tff1Q08423 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tff1Q08423 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.62■□□□□ 0.41
Tff1Q08423 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Tff1Q08423 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tff1Q08423 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tff1Q08423 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tff1Q08423 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tff1Q08423 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tff1Q08423 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tff1Q08423 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tff1Q08423 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tff1Q08423 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tff1Q08423 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tff1Q08423 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tff1Q08423 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tff1Q08423 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tff1Q08423 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tff1Q08423 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Tff1Q08423 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tff1Q08423 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tff1Q08423 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tff1Q08423 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tff1Q08423 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tff1Q08423 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tff1Q08423 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tff1Q08423 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tff1Q08423 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tff1Q08423 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.59■□□□□ 0.41
Tff1Q08423 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.59■□□□□ 0.41
Tff1Q08423 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tff1Q08423 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tff1Q08423 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.58■□□□□ 0.41
Tff1Q08423 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tff1Q08423 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.58■□□□□ 0.4
Tff1Q08423 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tff1Q08423 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tff1Q08423 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tff1Q08423 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tff1Q08423 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tff1Q08423 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.57■□□□□ 0.4
Tff1Q08423 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms