Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
PrkdcP97313 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrkdcP97313 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PrkdcP97313 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PrkdcP97313 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrkdcP97313 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.28■□□□□ 0.04
PrkdcP97313 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrkdcP97313 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PrkdcP97313 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.28■□□□□ 0.04
PrkdcP97313 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.28■□□□□ 0.04
PrkdcP97313 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.28■□□□□ 0.04
PrkdcP97313 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.28■□□□□ 0.04
PrkdcP97313 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.28■□□□□ 0.04
PrkdcP97313 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.28■□□□□ 0.04
PrkdcP97313 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PrkdcP97313 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrkdcP97313 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PrkdcP97313 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PrkdcP97313 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrkdcP97313 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.27■□□□□ 0.03
PrkdcP97313 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PrkdcP97313 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrkdcP97313 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.26■□□□□ 0.03
PrkdcP97313 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.26■□□□□ 0.03
PrkdcP97313 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PrkdcP97313 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrkdcP97313 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrkdcP97313 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrkdcP97313 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrkdcP97313 Gm27405-201ENSMUST00000184201 112 ntBASIC15.25■□□□□ 0.03
PrkdcP97313 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrkdcP97313 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.25■□□□□ 0.03
PrkdcP97313 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrkdcP97313 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrkdcP97313 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.24■□□□□ 0.03
PrkdcP97313 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.24■□□□□ 0.03
PrkdcP97313 Gm37179-201ENSMUST00000194862 823 ntBASIC15.24■□□□□ 0.03
PrkdcP97313 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.24■□□□□ 0.03
PrkdcP97313 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrkdcP97313 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.23■□□□□ 0.03
PrkdcP97313 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PrkdcP97313 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.23■□□□□ 0.03
PrkdcP97313 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PrkdcP97313 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PrkdcP97313 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PrkdcP97313 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PrkdcP97313 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PrkdcP97313 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PrkdcP97313 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.22■□□□□ 0.03
PrkdcP97313 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PrkdcP97313 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.22■□□□□ 0.03
PrkdcP97313 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.22■□□□□ 0.03
PrkdcP97313 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PrkdcP97313 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PrkdcP97313 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PrkdcP97313 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.21■□□□□ 0.03
PrkdcP97313 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.21■□□□□ 0.03
PrkdcP97313 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PrkdcP97313 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.2■□□□□ 0.02
PrkdcP97313 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PrkdcP97313 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PrkdcP97313 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PrkdcP97313 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PrkdcP97313 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.2■□□□□ 0.02
PrkdcP97313 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PrkdcP97313 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PrkdcP97313 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrkdcP97313 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrkdcP97313 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrkdcP97313 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PrkdcP97313 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrkdcP97313 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrkdcP97313 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.19■□□□□ 0.02
PrkdcP97313 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PrkdcP97313 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PrkdcP97313 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PrkdcP97313 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PrkdcP97313 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.19■□□□□ 0.02
PrkdcP97313 Gm43137-201ENSMUST00000198052 594 ntBASIC15.19■□□□□ 0.02
PrkdcP97313 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.18■□□□□ 0.02
PrkdcP97313 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrkdcP97313 Spcs1-204ENSMUST00000226782 949 ntBASIC15.18■□□□□ 0.02
PrkdcP97313 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PrkdcP97313 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.18■□□□□ 0.02
PrkdcP97313 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PrkdcP97313 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PrkdcP97313 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.17■□□□□ 0.02
PrkdcP97313 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkdcP97313 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrkdcP97313 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PrkdcP97313 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrkdcP97313 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.17■□□□□ 0.02
PrkdcP97313 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms