Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim4P70271 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.74■□□□□ 0.43
Pdlim4P70271 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.74■□□□□ 0.43
Pdlim4P70271 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim4P70271 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim4P70271 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim4P70271 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim4P70271 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim4P70271 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim4P70271 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim4P70271 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim4P70271 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Gm22567-201ENSMUST00000175542 342 ntBASIC17.72■□□□□ 0.43
Pdlim4P70271 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim4P70271 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim4P70271 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim4P70271 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.72■□□□□ 0.43
Pdlim4P70271 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pdlim4P70271 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pdlim4P70271 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.71■□□□□ 0.43
Pdlim4P70271 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pdlim4P70271 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim4P70271 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pdlim4P70271 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim4P70271 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim4P70271 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim4P70271 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim4P70271 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim4P70271 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.7■□□□□ 0.42
Pdlim4P70271 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim4P70271 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim4P70271 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim4P70271 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.68■□□□□ 0.42
Pdlim4P70271 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim4P70271 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
Pdlim4P70271 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim4P70271 Gm5921-201ENSMUST00000075898 882 ntBASIC17.68■□□□□ 0.42
Pdlim4P70271 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim4P70271 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim4P70271 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.67■□□□□ 0.42
Pdlim4P70271 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.67■□□□□ 0.42
Pdlim4P70271 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim4P70271 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.67■□□□□ 0.42
Pdlim4P70271 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim4P70271 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim4P70271 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim4P70271 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim4P70271 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim4P70271 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.66■□□□□ 0.42
Pdlim4P70271 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim4P70271 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.65■□□□□ 0.42
Pdlim4P70271 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.65■□□□□ 0.42
Pdlim4P70271 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.65■□□□□ 0.42
Pdlim4P70271 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.65■□□□□ 0.42
Pdlim4P70271 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim4P70271 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms