Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ThraP63058 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ThraP63058 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ThraP63058 Gm13238-201ENSMUST00000117655 780 ntBASIC21.57■■□□□ 1.04
ThraP63058 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ThraP63058 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ThraP63058 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ThraP63058 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ThraP63058 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ThraP63058 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ThraP63058 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.56■■□□□ 1.04
ThraP63058 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.56■■□□□ 1.04
ThraP63058 Gm45444-201ENSMUST00000211394 898 ntBASIC21.56■■□□□ 1.04
ThraP63058 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ThraP63058 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ThraP63058 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ThraP63058 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ThraP63058 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ThraP63058 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ThraP63058 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ThraP63058 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ThraP63058 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ThraP63058 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ThraP63058 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ThraP63058 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ThraP63058 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.54■■□□□ 1.04
ThraP63058 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ThraP63058 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.54■■□□□ 1.04
ThraP63058 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ThraP63058 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ThraP63058 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.52■■□□□ 1.04
ThraP63058 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ThraP63058 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.52■■□□□ 1.04
ThraP63058 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
ThraP63058 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ThraP63058 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ThraP63058 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.52■■□□□ 1.04
ThraP63058 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.52■■□□□ 1.03
ThraP63058 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.52■■□□□ 1.03
ThraP63058 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ThraP63058 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ThraP63058 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ThraP63058 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ThraP63058 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ThraP63058 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ThraP63058 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ThraP63058 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.5■■□□□ 1.03
ThraP63058 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ThraP63058 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ThraP63058 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.5■■□□□ 1.03
ThraP63058 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ThraP63058 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ThraP63058 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ThraP63058 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.49■■□□□ 1.03
ThraP63058 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ThraP63058 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ThraP63058 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ThraP63058 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.49■■□□□ 1.03
ThraP63058 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ThraP63058 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ThraP63058 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ThraP63058 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ThraP63058 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ThraP63058 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ThraP63058 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ThraP63058 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ThraP63058 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ThraP63058 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ThraP63058 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ThraP63058 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.46■■□□□ 1.03
ThraP63058 Gm15820-201ENSMUST00000201566 728 ntBASIC21.46■■□□□ 1.03
ThraP63058 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ThraP63058 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.46■■□□□ 1.03
ThraP63058 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ThraP63058 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ThraP63058 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ThraP63058 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ThraP63058 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ThraP63058 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ThraP63058 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ThraP63058 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ThraP63058 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ThraP63058 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.44■■□□□ 1.02
ThraP63058 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ThraP63058 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.44■■□□□ 1.02
ThraP63058 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ThraP63058 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ThraP63058 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ThraP63058 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ThraP63058 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.43■■□□□ 1.02
ThraP63058 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.43■■□□□ 1.02
ThraP63058 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.43■■□□□ 1.02
ThraP63058 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.43■■□□□ 1.02
ThraP63058 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ThraP63058 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ThraP63058 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ThraP63058 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.43■■□□□ 1.02
ThraP63058 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ThraP63058 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.42■■□□□ 1.02
ThraP63058 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms