Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lsm6P62313 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.82■□□□□ 0.6
Lsm6P62313 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lsm6P62313 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm6P62313 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm6P62313 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.81■□□□□ 0.6
Lsm6P62313 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm6P62313 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.81■□□□□ 0.6
Lsm6P62313 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm6P62313 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm6P62313 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.81■□□□□ 0.6
Lsm6P62313 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm6P62313 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm6P62313 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm6P62313 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Lsm6P62313 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm6P62313 Gm10420-201ENSMUST00000121713 882 ntBASIC18.8■□□□□ 0.6
Lsm6P62313 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.8■□□□□ 0.6
Lsm6P62313 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm6P62313 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lsm6P62313 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lsm6P62313 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm6P62313 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm6P62313 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm6P62313 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm6P62313 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm6P62313 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm6P62313 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm6P62313 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm6P62313 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm6P62313 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm6P62313 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm6P62313 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm6P62313 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm6P62313 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.77■□□□□ 0.6
Lsm6P62313 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lsm6P62313 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm6P62313 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Lsm6P62313 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm6P62313 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Lsm6P62313 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lsm6P62313 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.76■□□□□ 0.59
Lsm6P62313 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Lsm6P62313 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm6P62313 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm6P62313 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Lsm6P62313 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.75■□□□□ 0.59
Lsm6P62313 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm6P62313 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.75■□□□□ 0.59
Lsm6P62313 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lsm6P62313 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm6P62313 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm6P62313 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.75■□□□□ 0.59
Lsm6P62313 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm6P62313 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.74■□□□□ 0.59
Lsm6P62313 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.74■□□□□ 0.59
Lsm6P62313 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.74■□□□□ 0.59
Lsm6P62313 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Lsm6P62313 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Lsm6P62313 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.74■□□□□ 0.59
Lsm6P62313 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm6P62313 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm6P62313 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm6P62313 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm6P62313 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lsm6P62313 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm6P62313 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm6P62313 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm6P62313 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm6P62313 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm6P62313 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm6P62313 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm6P62313 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.72■□□□□ 0.59
Lsm6P62313 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm6P62313 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm6P62313 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm6P62313 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.71■□□□□ 0.59
Lsm6P62313 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm6P62313 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms