Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ube2d3P61079 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube2d3P61079 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube2d3P61079 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ube2d3P61079 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ube2d3P61079 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube2d3P61079 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube2d3P61079 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube2d3P61079 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ube2d3P61079 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube2d3P61079 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube2d3P61079 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ube2d3P61079 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.26■□□□□ 0.03
Ube2d3P61079 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube2d3P61079 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube2d3P61079 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Ube2d3P61079 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube2d3P61079 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube2d3P61079 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.25■□□□□ 0.03
Ube2d3P61079 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.25■□□□□ 0.03
Ube2d3P61079 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube2d3P61079 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube2d3P61079 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ube2d3P61079 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.24■□□□□ 0.03
Ube2d3P61079 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ube2d3P61079 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube2d3P61079 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube2d3P61079 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube2d3P61079 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube2d3P61079 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube2d3P61079 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.23■□□□□ 0.03
Ube2d3P61079 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.23■□□□□ 0.03
Ube2d3P61079 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube2d3P61079 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube2d3P61079 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube2d3P61079 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ube2d3P61079 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube2d3P61079 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube2d3P61079 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube2d3P61079 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube2d3P61079 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube2d3P61079 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.21■□□□□ 0.03
Ube2d3P61079 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube2d3P61079 Gm9806-201ENSMUST00000051080 552 ntBASIC15.21■□□□□ 0.03
Ube2d3P61079 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube2d3P61079 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ube2d3P61079 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ube2d3P61079 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Scarna2-201ENSMUST00000157560 414 ntBASIC15.2■□□□□ 0.02
Ube2d3P61079 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.2■□□□□ 0.02
Ube2d3P61079 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube2d3P61079 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.19■□□□□ 0.02
Ube2d3P61079 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.19■□□□□ 0.02
Ube2d3P61079 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ube2d3P61079 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ube2d3P61079 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.19■□□□□ 0.02
Ube2d3P61079 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.19■□□□□ 0.02
Ube2d3P61079 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube2d3P61079 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ube2d3P61079 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ube2d3P61079 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube2d3P61079 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube2d3P61079 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube2d3P61079 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ube2d3P61079 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ube2d3P61079 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.17■□□□□ 0.02
Ube2d3P61079 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Gm16437-201ENSMUST00000025669 507 ntBASIC15.17■□□□□ 0.02
Ube2d3P61079 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube2d3P61079 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube2d3P61079 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube2d3P61079 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube2d3P61079 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ube2d3P61079 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube2d3P61079 Gm11687-201ENSMUST00000118911 886 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms