Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Limk1P53668 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Limk1P53668 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Limk1P53668 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Limk1P53668 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Limk1P53668 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Limk1P53668 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Limk1P53668 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Limk1P53668 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Limk1P53668 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.02■□□□□ 0.96
Limk1P53668 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Limk1P53668 Gm10399-202ENSMUST00000202768 748 ntBASIC21.02■□□□□ 0.96
Limk1P53668 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk1P53668 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk1P53668 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
Limk1P53668 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk1P53668 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Limk1P53668 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Limk1P53668 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk1P53668 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Limk1P53668 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk1P53668 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Limk1P53668 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Limk1P53668 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21■□□□□ 0.95
Limk1P53668 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21■□□□□ 0.95
Limk1P53668 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21■□□□□ 0.95
Limk1P53668 Golgb1-201ENSMUST00000023534 498 ntBASIC21■□□□□ 0.95
Limk1P53668 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21■□□□□ 0.95
Limk1P53668 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Limk1P53668 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Limk1P53668 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Limk1P53668 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Limk1P53668 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Limk1P53668 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Limk1P53668 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Limk1P53668 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Limk1P53668 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Limk1P53668 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk1P53668 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Limk1P53668 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Limk1P53668 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.97■□□□□ 0.95
Limk1P53668 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.97■□□□□ 0.95
Limk1P53668 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Limk1P53668 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk1P53668 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk1P53668 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Limk1P53668 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk1P53668 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk1P53668 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Limk1P53668 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Limk1P53668 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk1P53668 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.96■□□□□ 0.95
Limk1P53668 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Limk1P53668 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk1P53668 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Limk1P53668 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Limk1P53668 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.95■□□□□ 0.94
Limk1P53668 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Limk1P53668 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Limk1P53668 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Limk1P53668 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Limk1P53668 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.94■□□□□ 0.94
Limk1P53668 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.94■□□□□ 0.94
Limk1P53668 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Limk1P53668 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
Limk1P53668 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Limk1P53668 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Limk1P53668 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Limk1P53668 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.93■□□□□ 0.94
Limk1P53668 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk1P53668 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Limk1P53668 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.93■□□□□ 0.94
Limk1P53668 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Limk1P53668 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk1P53668 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk1P53668 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.93■□□□□ 0.94
Limk1P53668 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Limk1P53668 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.92■□□□□ 0.94
Limk1P53668 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.92■□□□□ 0.94
Limk1P53668 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Limk1P53668 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Limk1P53668 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Limk1P53668 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Limk1P53668 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk1P53668 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.91■□□□□ 0.94
Limk1P53668 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk1P53668 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk1P53668 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk1P53668 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Limk1P53668 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Limk1P53668 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Limk1P53668 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms