Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.18■□□□□ 0.98
Lbx1P52955 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lbx1P52955 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lbx1P52955 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lbx1P52955 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.15■□□□□ 0.98
Lbx1P52955 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lbx1P52955 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lbx1P52955 Gm42642-201ENSMUST00000200683 355 ntBASIC21.15■□□□□ 0.98
Lbx1P52955 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.15■□□□□ 0.98
Lbx1P52955 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lbx1P52955 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lbx1P52955 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lbx1P52955 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lbx1P52955 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lbx1P52955 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lbx1P52955 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lbx1P52955 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
Lbx1P52955 Gm8493-201ENSMUST00000196881 489 ntBASIC21.14■□□□□ 0.97
Lbx1P52955 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lbx1P52955 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lbx1P52955 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lbx1P52955 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lbx1P52955 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.12■□□□□ 0.97
Lbx1P52955 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.12■□□□□ 0.97
Lbx1P52955 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.12■□□□□ 0.97
Lbx1P52955 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lbx1P52955 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lbx1P52955 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lbx1P52955 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lbx1P52955 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lbx1P52955 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Lbx1P52955 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lbx1P52955 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lbx1P52955 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lbx1P52955 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lbx1P52955 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Lbx1P52955 Gm10849-201ENSMUST00000100397 618 ntBASIC21.1■□□□□ 0.97
Lbx1P52955 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lbx1P52955 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Lbx1P52955 Gm10493-201ENSMUST00000097270 612 ntBASIC21.1■□□□□ 0.97
Lbx1P52955 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lbx1P52955 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lbx1P52955 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lbx1P52955 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lbx1P52955 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lbx1P52955 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lbx1P52955 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lbx1P52955 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lbx1P52955 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lbx1P52955 Mir7071-201ENSMUST00000184847 69 ntBASIC21.08■□□□□ 0.97
Lbx1P52955 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.08■□□□□ 0.97
Lbx1P52955 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.08■□□□□ 0.97
Lbx1P52955 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lbx1P52955 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lbx1P52955 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Lbx1P52955 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lbx1P52955 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lbx1P52955 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lbx1P52955 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lbx1P52955 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lbx1P52955 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lbx1P52955 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.06■□□□□ 0.96
Lbx1P52955 Gm27801-201ENSMUST00000184174 223 ntBASIC21.06■□□□□ 0.96
Lbx1P52955 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.06■□□□□ 0.96
Lbx1P52955 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lbx1P52955 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lbx1P52955 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lbx1P52955 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lbx1P52955 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lbx1P52955 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lbx1P52955 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lbx1P52955 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lbx1P52955 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lbx1P52955 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lbx1P52955 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.04■□□□□ 0.96
Lbx1P52955 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lbx1P52955 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.04■□□□□ 0.96
Lbx1P52955 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.04■□□□□ 0.96
Lbx1P52955 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lbx1P52955 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lbx1P52955 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lbx1P52955 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lbx1P52955 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lbx1P52955 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lbx1P52955 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lbx1P52955 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lbx1P52955 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Lbx1P52955 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lbx1P52955 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Lbx1P52955 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.02■□□□□ 0.96
Lbx1P52955 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.02■□□□□ 0.96
Lbx1P52955 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lbx1P52955 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lbx1P52955 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Lbx1P52955 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms