Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
GdnfP48540 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GdnfP48540 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GdnfP48540 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
GdnfP48540 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GdnfP48540 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GdnfP48540 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.64■□□□□ 0.57
GdnfP48540 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GdnfP48540 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.64■□□□□ 0.57
GdnfP48540 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GdnfP48540 Gm11175-201ENSMUST00000116172 543 ntBASIC18.64■□□□□ 0.57
GdnfP48540 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GdnfP48540 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GdnfP48540 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GdnfP48540 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GdnfP48540 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GdnfP48540 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GdnfP48540 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GdnfP48540 Gm16437-201ENSMUST00000025669 507 ntBASIC18.63■□□□□ 0.57
GdnfP48540 Gm9806-201ENSMUST00000051080 552 ntBASIC18.63■□□□□ 0.57
GdnfP48540 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GdnfP48540 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GdnfP48540 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GdnfP48540 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GdnfP48540 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
GdnfP48540 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GdnfP48540 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GdnfP48540 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.62■□□□□ 0.57
GdnfP48540 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GdnfP48540 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GdnfP48540 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GdnfP48540 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GdnfP48540 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GdnfP48540 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GdnfP48540 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GdnfP48540 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GdnfP48540 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GdnfP48540 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GdnfP48540 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GdnfP48540 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GdnfP48540 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GdnfP48540 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GdnfP48540 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.6■□□□□ 0.57
GdnfP48540 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GdnfP48540 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GdnfP48540 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GdnfP48540 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GdnfP48540 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GdnfP48540 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GdnfP48540 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GdnfP48540 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GdnfP48540 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GdnfP48540 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GdnfP48540 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GdnfP48540 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
GdnfP48540 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.58■□□□□ 0.57
GdnfP48540 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GdnfP48540 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.58■□□□□ 0.57
GdnfP48540 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GdnfP48540 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GdnfP48540 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GdnfP48540 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GdnfP48540 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GdnfP48540 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GdnfP48540 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GdnfP48540 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GdnfP48540 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GdnfP48540 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GdnfP48540 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.56■□□□□ 0.56
GdnfP48540 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GdnfP48540 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GdnfP48540 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GdnfP48540 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GdnfP48540 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Gm11687-201ENSMUST00000118911 886 ntBASIC18.55■□□□□ 0.56
GdnfP48540 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GdnfP48540 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GdnfP48540 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GdnfP48540 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GdnfP48540 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GdnfP48540 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.54■□□□□ 0.56
GdnfP48540 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GdnfP48540 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GdnfP48540 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.54■□□□□ 0.56
GdnfP48540 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GdnfP48540 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 249.6 ms