Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
HttP42859 Gm26571-201ENSMUST00000181399 666 ntBASIC23.79■■□□□ 1.4
HttP42859 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HttP42859 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.78■■□□□ 1.4
HttP42859 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.78■■□□□ 1.4
HttP42859 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HttP42859 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HttP42859 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HttP42859 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.78■■□□□ 1.4
HttP42859 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
HttP42859 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
HttP42859 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HttP42859 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HttP42859 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HttP42859 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HttP42859 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HttP42859 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
HttP42859 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HttP42859 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.76■■□□□ 1.39
HttP42859 Gm7291-201ENSMUST00000199147 382 ntBASIC23.76■■□□□ 1.39
HttP42859 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HttP42859 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HttP42859 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.75■■□□□ 1.39
HttP42859 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HttP42859 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HttP42859 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HttP42859 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
HttP42859 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HttP42859 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HttP42859 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HttP42859 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HttP42859 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HttP42859 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HttP42859 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HttP42859 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.73■■□□□ 1.39
HttP42859 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.73■■□□□ 1.39
HttP42859 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
HttP42859 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HttP42859 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HttP42859 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
HttP42859 Gm43017-201ENSMUST00000198296 752 ntBASIC23.72■■□□□ 1.39
HttP42859 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.72■■□□□ 1.39
HttP42859 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HttP42859 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.71■■□□□ 1.39
HttP42859 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HttP42859 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.71■■□□□ 1.39
HttP42859 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.71■■□□□ 1.39
HttP42859 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
HttP42859 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.39
HttP42859 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.7■■□□□ 1.39
HttP42859 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.7■■□□□ 1.38
HttP42859 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HttP42859 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HttP42859 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HttP42859 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.69■■□□□ 1.38
HttP42859 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HttP42859 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.69■■□□□ 1.38
HttP42859 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HttP42859 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.68■■□□□ 1.38
HttP42859 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
HttP42859 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HttP42859 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HttP42859 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HttP42859 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HttP42859 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.67■■□□□ 1.38
HttP42859 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.67■■□□□ 1.38
HttP42859 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
HttP42859 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HttP42859 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
HttP42859 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HttP42859 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HttP42859 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HttP42859 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HttP42859 Gm27405-201ENSMUST00000184201 112 ntBASIC23.66■■□□□ 1.38
HttP42859 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HttP42859 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HttP42859 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.65■■□□□ 1.38
HttP42859 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
HttP42859 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HttP42859 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
HttP42859 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HttP42859 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.65■■□□□ 1.38
HttP42859 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HttP42859 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
HttP42859 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HttP42859 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
HttP42859 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HttP42859 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.63■■□□□ 1.37
HttP42859 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HttP42859 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HttP42859 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HttP42859 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.62■■□□□ 1.37
HttP42859 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.62■■□□□ 1.37
HttP42859 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HttP42859 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HttP42859 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
HttP42859 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.61■■□□□ 1.37
HttP42859 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HttP42859 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HttP42859 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms