Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SnrpbP27048 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SnrpbP27048 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SnrpbP27048 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.76■□□□□ 0.59
SnrpbP27048 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.76■□□□□ 0.59
SnrpbP27048 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SnrpbP27048 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SnrpbP27048 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SnrpbP27048 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SnrpbP27048 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SnrpbP27048 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SnrpbP27048 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SnrpbP27048 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.75■□□□□ 0.59
SnrpbP27048 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SnrpbP27048 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SnrpbP27048 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SnrpbP27048 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SnrpbP27048 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.75■□□□□ 0.59
SnrpbP27048 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.74■□□□□ 0.59
SnrpbP27048 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SnrpbP27048 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.74■□□□□ 0.59
SnrpbP27048 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.74■□□□□ 0.59
SnrpbP27048 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SnrpbP27048 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.74■□□□□ 0.59
SnrpbP27048 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SnrpbP27048 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SnrpbP27048 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SnrpbP27048 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SnrpbP27048 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SnrpbP27048 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SnrpbP27048 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SnrpbP27048 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SnrpbP27048 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SnrpbP27048 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SnrpbP27048 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SnrpbP27048 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.71■□□□□ 0.59
SnrpbP27048 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SnrpbP27048 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SnrpbP27048 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SnrpbP27048 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
SnrpbP27048 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.7■□□□□ 0.58
SnrpbP27048 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SnrpbP27048 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SnrpbP27048 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SnrpbP27048 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SnrpbP27048 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SnrpbP27048 Gm4799-201ENSMUST00000095396 657 ntBASIC18.69■□□□□ 0.58
SnrpbP27048 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SnrpbP27048 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SnrpbP27048 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SnrpbP27048 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SnrpbP27048 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SnrpbP27048 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SnrpbP27048 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SnrpbP27048 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SnrpbP27048 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.67■□□□□ 0.58
SnrpbP27048 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.67■□□□□ 0.58
SnrpbP27048 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SnrpbP27048 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SnrpbP27048 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.67■□□□□ 0.58
SnrpbP27048 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SnrpbP27048 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SnrpbP27048 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SnrpbP27048 Gm9812-201ENSMUST00000061934 968 ntBASIC18.66■□□□□ 0.58
SnrpbP27048 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.66■□□□□ 0.58
SnrpbP27048 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SnrpbP27048 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.66■□□□□ 0.58
SnrpbP27048 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SnrpbP27048 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SnrpbP27048 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SnrpbP27048 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SnrpbP27048 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.65■□□□□ 0.58
SnrpbP27048 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SnrpbP27048 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SnrpbP27048 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SnrpbP27048 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.64■□□□□ 0.57
SnrpbP27048 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SnrpbP27048 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.64■□□□□ 0.57
SnrpbP27048 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SnrpbP27048 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SnrpbP27048 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SnrpbP27048 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SnrpbP27048 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.63■□□□□ 0.57
SnrpbP27048 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms