Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.44■□□□□ 0.54
Hoxa6P09092 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Hoxa6P09092 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.44■□□□□ 0.54
Hoxa6P09092 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxa6P09092 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxa6P09092 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxa6P09092 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxa6P09092 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.43■□□□□ 0.54
Hoxa6P09092 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxa6P09092 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxa6P09092 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa6P09092 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.42■□□□□ 0.54
Hoxa6P09092 Etf1-202ENSMUST00000180351 108 ntBASIC18.42■□□□□ 0.54
Hoxa6P09092 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.42■□□□□ 0.54
Hoxa6P09092 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa6P09092 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa6P09092 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa6P09092 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Hoxa6P09092 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Hoxa6P09092 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa6P09092 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.41■□□□□ 0.54
Hoxa6P09092 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa6P09092 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa6P09092 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa6P09092 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa6P09092 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.4■□□□□ 0.54
Hoxa6P09092 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa6P09092 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hoxa6P09092 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa6P09092 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa6P09092 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Hoxa6P09092 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa6P09092 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hoxa6P09092 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa6P09092 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa6P09092 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa6P09092 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa6P09092 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxa6P09092 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.38■□□□□ 0.53
Hoxa6P09092 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa6P09092 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Hoxa6P09092 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa6P09092 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa6P09092 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa6P09092 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa6P09092 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa6P09092 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa6P09092 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa6P09092 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.36■□□□□ 0.53
Hoxa6P09092 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa6P09092 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.36■□□□□ 0.53
Hoxa6P09092 Gm7417-201ENSMUST00000192950 473 ntBASIC18.36■□□□□ 0.53
Hoxa6P09092 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.36■□□□□ 0.53
Hoxa6P09092 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.36■□□□□ 0.53
Hoxa6P09092 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hoxa6P09092 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa6P09092 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.35■□□□□ 0.53
Hoxa6P09092 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.35■□□□□ 0.53
Hoxa6P09092 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa6P09092 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa6P09092 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxa6P09092 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa6P09092 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa6P09092 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hoxa6P09092 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa6P09092 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hoxa6P09092 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa6P09092 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxa6P09092 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa6P09092 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxa6P09092 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa6P09092 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa6P09092 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.33■□□□□ 0.52
Hoxa6P09092 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.33■□□□□ 0.52
Hoxa6P09092 Gm10399-202ENSMUST00000202768 748 ntBASIC18.33■□□□□ 0.52
Hoxa6P09092 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa6P09092 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxa6P09092 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Hoxa6P09092 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.32■□□□□ 0.52
Hoxa6P09092 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa6P09092 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa6P09092 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa6P09092 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxa6P09092 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa6P09092 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxa6P09092 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms