Protein–RNA interactions for Protein: P07744

Krt4, Keratin, type II cytoskeletal 4, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt4P07744 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt4P07744 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.28■■□□□ 1
Krt4P07744 Gm11175-201ENSMUST00000116172 543 ntBASIC21.28■■□□□ 1
Krt4P07744 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Krt4P07744 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.28■■□□□ 1
Krt4P07744 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.27■■□□□ 1
Krt4P07744 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.27■■□□□ 1
Krt4P07744 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.27■■□□□ 1
Krt4P07744 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.27■■□□□ 1
Krt4P07744 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Krt4P07744 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.27■□□□□ 0.99
Krt4P07744 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Krt4P07744 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Krt4P07744 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Krt4P07744 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krt4P07744 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
Krt4P07744 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Krt4P07744 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Krt4P07744 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krt4P07744 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Krt4P07744 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krt4P07744 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Krt4P07744 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.24■□□□□ 0.99
Krt4P07744 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt4P07744 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt4P07744 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Krt4P07744 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt4P07744 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt4P07744 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.23■□□□□ 0.99
Krt4P07744 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt4P07744 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Krt4P07744 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt4P07744 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.22■□□□□ 0.99
Krt4P07744 Gm27502-201ENSMUST00000183495 199 ntBASIC21.22■□□□□ 0.99
Krt4P07744 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Krt4P07744 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Krt4P07744 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Krt4P07744 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt4P07744 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Krt4P07744 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.21■□□□□ 0.99
Krt4P07744 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt4P07744 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Krt4P07744 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Krt4P07744 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Krt4P07744 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt4P07744 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt4P07744 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt4P07744 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt4P07744 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Krt4P07744 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Krt4P07744 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt4P07744 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt4P07744 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Gm14523-201ENSMUST00000117260 558 ntBASIC21.19■□□□□ 0.98
Krt4P07744 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Krt4P07744 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt4P07744 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Krt4P07744 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.18■□□□□ 0.98
Krt4P07744 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.18■□□□□ 0.98
Krt4P07744 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt4P07744 Mir6538-201ENSMUST00000183713 110 ntBASIC21.18■□□□□ 0.98
Krt4P07744 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.18■□□□□ 0.98
Krt4P07744 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt4P07744 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.18■□□□□ 0.98
Krt4P07744 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt4P07744 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.17■□□□□ 0.98
Krt4P07744 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Krt4P07744 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt4P07744 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt4P07744 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt4P07744 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt4P07744 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.16■□□□□ 0.98
Krt4P07744 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Krt4P07744 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt4P07744 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Krt4P07744 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Krt4P07744 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Krt4P07744 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt4P07744 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms