Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.28■□□□□ 0.36
P06323 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.28■□□□□ 0.36
P06323 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06323 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06323 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P06323 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P06323 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P06323 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
P06323 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06323 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
P06323 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.27■□□□□ 0.36
P06323 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
P06323 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P06323 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P06323 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P06323 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06323 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06323 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
P06323 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06323 Scarna2-201ENSMUST00000157560 414 ntBASIC17.26■□□□□ 0.35
P06323 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.26■□□□□ 0.35
P06323 Gm9806-201ENSMUST00000051080 552 ntBASIC17.26■□□□□ 0.35
P06323 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P06323 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
P06323 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06323 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06323 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.25■□□□□ 0.35
P06323 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06323 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06323 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P06323 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06323 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06323 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
P06323 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
P06323 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06323 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.24■□□□□ 0.35
P06323 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06323 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P06323 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P06323 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.23■□□□□ 0.35
P06323 Gm16437-201ENSMUST00000025669 507 ntBASIC17.23■□□□□ 0.35
P06323 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06323 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.22■□□□□ 0.35
P06323 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
P06323 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06323 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P06323 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P06323 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.22■□□□□ 0.35
P06323 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
P06323 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06323 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
P06323 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06323 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06323 Gm11687-201ENSMUST00000118911 886 ntBASIC17.21■□□□□ 0.35
P06323 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
P06323 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P06323 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P06323 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
P06323 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
P06323 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
P06323 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06323 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06323 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
P06323 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06323 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P06323 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.2■□□□□ 0.34
P06323 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P06323 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06323 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06323 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06323 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
P06323 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06323 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.19■□□□□ 0.34
P06323 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.19■□□□□ 0.34
P06323 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.19■□□□□ 0.34
P06323 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P06323 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.19■□□□□ 0.34
P06323 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06323 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
P06323 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P06323 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P06323 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.17■□□□□ 0.34
P06323 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P06323 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
P06323 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.17■□□□□ 0.34
P06323 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P06323 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06323 Notumos-201ENSMUST00000151998 2659 ntBASIC17.16■□□□□ 0.34
P06323 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06323 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06323 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06323 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P06323 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms