Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
P01852 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
P01852 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
P01852 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
P01852 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P01852 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
P01852 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P01852 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P01852 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.57■□□□□ 0.72
P01852 Gm43566-201ENSMUST00000196851 808 ntBASIC19.57■□□□□ 0.72
P01852 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P01852 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P01852 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
P01852 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P01852 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P01852 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.56■□□□□ 0.72
P01852 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
P01852 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
P01852 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P01852 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P01852 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
P01852 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P01852 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P01852 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.55■□□□□ 0.72
P01852 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P01852 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
P01852 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P01852 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
P01852 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P01852 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.54■□□□□ 0.72
P01852 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P01852 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.54■□□□□ 0.72
P01852 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P01852 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P01852 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
P01852 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
P01852 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
P01852 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P01852 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P01852 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P01852 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
P01852 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P01852 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P01852 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01852 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01852 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01852 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.52■□□□□ 0.72
P01852 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
P01852 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
P01852 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01852 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P01852 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01852 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01852 Gm13238-201ENSMUST00000117655 780 ntBASIC19.51■□□□□ 0.71
P01852 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.51■□□□□ 0.71
P01852 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
P01852 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.51■□□□□ 0.71
P01852 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01852 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01852 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P01852 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P01852 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
P01852 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P01852 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P01852 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
P01852 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P01852 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P01852 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P01852 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P01852 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
P01852 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
P01852 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P01852 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P01852 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P01852 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P01852 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P01852 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P01852 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.48■□□□□ 0.71
P01852 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P01852 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
P01852 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P01852 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P01852 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
P01852 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
P01852 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P01852 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.47■□□□□ 0.71
P01852 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P01852 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
P01852 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
P01852 Gm5812-201ENSMUST00000061073 957 ntBASIC19.46■□□□□ 0.71
P01852 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P01852 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P01852 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
P01852 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
P01852 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P01852 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P01852 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P01852 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P01852 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P01852 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms