Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10139O88245 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm10139O88245 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm10139O88245 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Gm16437-201ENSMUST00000025669 507 ntBASIC13.1□□□□□ -0.31
Gm10139O88245 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm10139O88245 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gm10139O88245 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Gm10139O88245 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gm10139O88245 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.09□□□□□ -0.31
Gm10139O88245 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.09□□□□□ -0.31
Gm10139O88245 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm10139O88245 Gm38160-201ENSMUST00000193090 2499 ntBASIC13.08□□□□□ -0.31
Gm10139O88245 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gm10139O88245 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm10139O88245 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC13.08□□□□□ -0.32
Gm10139O88245 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm10139O88245 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gm10139O88245 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm10139O88245 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.08□□□□□ -0.32
Gm10139O88245 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm10139O88245 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm10139O88245 Gm12504-201ENSMUST00000120860 2231 ntBASIC13.08□□□□□ -0.32
Gm10139O88245 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Gm10139O88245 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm10139O88245 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm10139O88245 Gm11687-201ENSMUST00000118911 886 ntBASIC13.07□□□□□ -0.32
Gm10139O88245 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm10139O88245 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.06□□□□□ -0.32
Gm10139O88245 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.06□□□□□ -0.32
Gm10139O88245 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm10139O88245 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Gm10139O88245 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Gm10139O88245 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm10139O88245 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Gm10139O88245 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gm10139O88245 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Gm10139O88245 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gm10139O88245 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.04□□□□□ -0.32
Gm10139O88245 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm10139O88245 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm10139O88245 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC13.03□□□□□ -0.32
Gm10139O88245 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gm10139O88245 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm10139O88245 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.03□□□□□ -0.32
Gm10139O88245 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gm10139O88245 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm10139O88245 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm10139O88245 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm10139O88245 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm10139O88245 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm10139O88245 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm10139O88245 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.02□□□□□ -0.33
Gm10139O88245 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms