Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Kcnu1O54982 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Kcnu1O54982 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Gm7332-201ENSMUST00000118351 454 ntBASIC22.93■■□□□ 1.26
Kcnu1O54982 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Kcnu1O54982 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Kcnu1O54982 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Kcnu1O54982 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Kcnu1O54982 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Kcnu1O54982 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Kcnu1O54982 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Kcnu1O54982 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Kcnu1O54982 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Kcnu1O54982 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Kcnu1O54982 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Kcnu1O54982 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Kcnu1O54982 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Kcnu1O54982 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Kcnu1O54982 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Kcnu1O54982 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Kcnu1O54982 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Kcnu1O54982 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.89■■□□□ 1.26
Kcnu1O54982 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Kcnu1O54982 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Kcnu1O54982 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Kcnu1O54982 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.89■■□□□ 1.25
Kcnu1O54982 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Kcnu1O54982 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Kcnu1O54982 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Kcnu1O54982 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.88■■□□□ 1.25
Kcnu1O54982 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Kcnu1O54982 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Kcnu1O54982 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.88■■□□□ 1.25
Kcnu1O54982 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.88■■□□□ 1.25
Kcnu1O54982 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Kcnu1O54982 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Kcnu1O54982 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.87■■□□□ 1.25
Kcnu1O54982 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.87■■□□□ 1.25
Kcnu1O54982 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.87■■□□□ 1.25
Kcnu1O54982 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnu1O54982 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.86■■□□□ 1.25
Kcnu1O54982 Gm12366-201ENSMUST00000121722 873 ntBASIC22.86■■□□□ 1.25
Kcnu1O54982 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.86■■□□□ 1.25
Kcnu1O54982 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Kcnu1O54982 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.86■■□□□ 1.25
Kcnu1O54982 Gm5786-201ENSMUST00000085368 882 ntBASIC22.86■■□□□ 1.25
Kcnu1O54982 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Kcnu1O54982 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Kcnu1O54982 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.85■■□□□ 1.25
Kcnu1O54982 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Kcnu1O54982 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Kcnu1O54982 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.85■■□□□ 1.25
Kcnu1O54982 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.85■■□□□ 1.25
Kcnu1O54982 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Kcnu1O54982 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Kcnu1O54982 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.84■■□□□ 1.25
Kcnu1O54982 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Kcnu1O54982 Mir6538-201ENSMUST00000183713 110 ntBASIC22.84■■□□□ 1.25
Kcnu1O54982 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Kcnu1O54982 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Kcnu1O54982 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.83■■□□□ 1.25
Kcnu1O54982 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
Kcnu1O54982 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Kcnu1O54982 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Kcnu1O54982 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Kcnu1O54982 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Kcnu1O54982 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.82■■□□□ 1.24
Kcnu1O54982 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Kcnu1O54982 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Kcnu1O54982 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Kcnu1O54982 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Kcnu1O54982 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Kcnu1O54982 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Kcnu1O54982 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Kcnu1O54982 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Kcnu1O54982 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Kcnu1O54982 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Kcnu1O54982 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Kcnu1O54982 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Kcnu1O54982 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Kcnu1O54982 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Kcnu1O54982 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Kcnu1O54982 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.79■■□□□ 1.24
Kcnu1O54982 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.79■■□□□ 1.24
Kcnu1O54982 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Kcnu1O54982 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms