Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm45102-201ENSMUST00000207427 857 ntBASIC21.83■■□□□ 1.09
Limk2O54785 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Limk2O54785 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Limk2O54785 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Limk2O54785 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Limk2O54785 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Limk2O54785 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Limk2O54785 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.82■■□□□ 1.08
Limk2O54785 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limk2O54785 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limk2O54785 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Limk2O54785 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.82■■□□□ 1.08
Limk2O54785 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.82■■□□□ 1.08
Limk2O54785 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.82■■□□□ 1.08
Limk2O54785 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Limk2O54785 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Limk2O54785 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limk2O54785 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Limk2O54785 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limk2O54785 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Limk2O54785 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.81■■□□□ 1.08
Limk2O54785 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limk2O54785 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Limk2O54785 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.8■■□□□ 1.08
Limk2O54785 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Limk2O54785 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Limk2O54785 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Limk2O54785 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.8■■□□□ 1.08
Limk2O54785 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Limk2O54785 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Limk2O54785 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limk2O54785 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limk2O54785 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limk2O54785 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Limk2O54785 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.79■■□□□ 1.08
Limk2O54785 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Limk2O54785 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Limk2O54785 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.79■■□□□ 1.08
Limk2O54785 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Limk2O54785 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.79■■□□□ 1.08
Limk2O54785 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.79■■□□□ 1.08
Limk2O54785 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limk2O54785 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.78■■□□□ 1.08
Limk2O54785 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Limk2O54785 Gm14117-201ENSMUST00000122417 843 ntBASIC21.78■■□□□ 1.08
Limk2O54785 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Limk2O54785 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Limk2O54785 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limk2O54785 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Limk2O54785 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limk2O54785 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Limk2O54785 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.77■■□□□ 1.08
Limk2O54785 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Limk2O54785 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Limk2O54785 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Limk2O54785 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Limk2O54785 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Limk2O54785 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limk2O54785 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limk2O54785 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Limk2O54785 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.76■■□□□ 1.07
Limk2O54785 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Limk2O54785 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Limk2O54785 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limk2O54785 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.75■■□□□ 1.07
Limk2O54785 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.75■■□□□ 1.07
Limk2O54785 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Limk2O54785 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Limk2O54785 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Limk2O54785 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Limk2O54785 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limk2O54785 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Limk2O54785 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Limk2O54785 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.73■■□□□ 1.07
Limk2O54785 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.73■■□□□ 1.07
Limk2O54785 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limk2O54785 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Limk2O54785 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Limk2O54785 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limk2O54785 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Limk2O54785 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Limk2O54785 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limk2O54785 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Limk2O54785 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Limk2O54785 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limk2O54785 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Limk2O54785 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Limk2O54785 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Limk2O54785 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limk2O54785 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Limk2O54785 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Limk2O54785 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Limk2O54785 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Limk2O54785 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.7■■□□□ 1.06
Limk2O54785 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.7■■□□□ 1.06
Limk2O54785 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Limk2O54785 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.69■■□□□ 1.06
Limk2O54785 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.69■■□□□ 1.06
Limk2O54785 Gm9959-201ENSMUST00000068277 390 ntBASIC21.69■■□□□ 1.06
Limk2O54785 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms