Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cx3cl1O35188 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Cx3cl1O35188 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 Gm13238-201ENSMUST00000117655 780 ntBASIC20.07■□□□□ 0.8
Cx3cl1O35188 Gm43566-201ENSMUST00000196851 808 ntBASIC20.07■□□□□ 0.8
Cx3cl1O35188 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cl1O35188 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cl1O35188 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cl1O35188 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cl1O35188 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cx3cl1O35188 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.04■□□□□ 0.8
Cx3cl1O35188 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.03■□□□□ 0.8
Cx3cl1O35188 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.03■□□□□ 0.8
Cx3cl1O35188 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cx3cl1O35188 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cx3cl1O35188 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cl1O35188 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cl1O35188 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cl1O35188 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cl1O35188 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cx3cl1O35188 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.02■□□□□ 0.8
Cx3cl1O35188 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Cx3cl1O35188 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cx3cl1O35188 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cx3cl1O35188 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cl1O35188 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Cx3cl1O35188 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cl1O35188 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cl1O35188 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cl1O35188 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cx3cl1O35188 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cx3cl1O35188 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cl1O35188 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cl1O35188 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cl1O35188 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cl1O35188 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
Cx3cl1O35188 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cl1O35188 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cl1O35188 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cx3cl1O35188 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.97■□□□□ 0.79
Cx3cl1O35188 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cx3cl1O35188 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cx3cl1O35188 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.96■□□□□ 0.79
Cx3cl1O35188 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cx3cl1O35188 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cx3cl1O35188 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.96■□□□□ 0.79
Cx3cl1O35188 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cx3cl1O35188 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cx3cl1O35188 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Cx3cl1O35188 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.95■□□□□ 0.78
Cx3cl1O35188 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms