Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.54■□□□□ 0.88
Polr2jO08740 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr2jO08740 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Polr2jO08740 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Polr2jO08740 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Polr2jO08740 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Polr2jO08740 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Polr2jO08740 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Polr2jO08740 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.52■□□□□ 0.88
Polr2jO08740 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Polr2jO08740 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.52■□□□□ 0.88
Polr2jO08740 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.52■□□□□ 0.88
Polr2jO08740 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Polr2jO08740 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.51■□□□□ 0.87
Polr2jO08740 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Polr2jO08740 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2jO08740 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Polr2jO08740 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Polr2jO08740 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.5■□□□□ 0.87
Polr2jO08740 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.5■□□□□ 0.87
Polr2jO08740 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Polr2jO08740 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.49■□□□□ 0.87
Polr2jO08740 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.49■□□□□ 0.87
Polr2jO08740 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Polr2jO08740 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Polr2jO08740 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.48■□□□□ 0.87
Polr2jO08740 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.48■□□□□ 0.87
Polr2jO08740 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Polr2jO08740 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Polr2jO08740 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Polr2jO08740 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr2jO08740 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Polr2jO08740 Gm6311-201ENSMUST00000073790 878 ntBASIC20.47■□□□□ 0.87
Polr2jO08740 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Polr2jO08740 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Polr2jO08740 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Polr2jO08740 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.46■□□□□ 0.87
Polr2jO08740 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Polr2jO08740 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Polr2jO08740 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Polr2jO08740 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Polr2jO08740 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
Polr2jO08740 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Polr2jO08740 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Polr2jO08740 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.43■□□□□ 0.86
Polr2jO08740 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.43■□□□□ 0.86
Polr2jO08740 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Polr2jO08740 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Polr2jO08740 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2jO08740 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms