Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.03■□□□□ 0.64
Raet1bO08603 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1bO08603 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1bO08603 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1bO08603 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1bO08603 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1bO08603 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.02■□□□□ 0.64
Raet1bO08603 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Raet1bO08603 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Raet1bO08603 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.01■□□□□ 0.63
Raet1bO08603 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1bO08603 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.01■□□□□ 0.63
Raet1bO08603 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1bO08603 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Raet1bO08603 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1bO08603 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1bO08603 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.01■□□□□ 0.63
Raet1bO08603 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19■□□□□ 0.63
Raet1bO08603 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19■□□□□ 0.63
Raet1bO08603 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19■□□□□ 0.63
Raet1bO08603 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Raet1bO08603 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Raet1bO08603 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19■□□□□ 0.63
Raet1bO08603 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19■□□□□ 0.63
Raet1bO08603 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Raet1bO08603 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Raet1bO08603 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Raet1bO08603 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Raet1bO08603 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Raet1bO08603 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.98■□□□□ 0.63
Raet1bO08603 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.98■□□□□ 0.63
Raet1bO08603 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.98■□□□□ 0.63
Raet1bO08603 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Raet1bO08603 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1bO08603 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.98■□□□□ 0.63
Raet1bO08603 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1bO08603 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.98■□□□□ 0.63
Raet1bO08603 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1bO08603 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1bO08603 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.97■□□□□ 0.63
Raet1bO08603 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1bO08603 Cap2-205ENSMUST00000225824 1634 ntBASIC18.97■□□□□ 0.63
Raet1bO08603 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1bO08603 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.97■□□□□ 0.63
Raet1bO08603 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1bO08603 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1bO08603 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.96■□□□□ 0.63
Raet1bO08603 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1bO08603 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1bO08603 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.96■□□□□ 0.63
Raet1bO08603 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1bO08603 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1bO08603 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Raet1bO08603 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1bO08603 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1bO08603 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1bO08603 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.94■□□□□ 0.62
Raet1bO08603 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.94■□□□□ 0.62
Raet1bO08603 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1bO08603 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1bO08603 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Raet1bO08603 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.93■□□□□ 0.62
Raet1bO08603 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1bO08603 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1bO08603 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1bO08603 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Raet1bO08603 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1bO08603 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.93■□□□□ 0.62
Raet1bO08603 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1bO08603 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1bO08603 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Raet1bO08603 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1bO08603 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1bO08603 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Raet1bO08603 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1bO08603 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Raet1bO08603 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1bO08603 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.92■□□□□ 0.62
Raet1bO08603 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1bO08603 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1bO08603 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1bO08603 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Raet1bO08603 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raet1bO08603 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.91■□□□□ 0.62
Raet1bO08603 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Raet1bO08603 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Raet1bO08603 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raet1bO08603 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raet1bO08603 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raet1bO08603 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raet1bO08603 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms