Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gm28043E0CXC2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.35■■□□□ 1.01
Gm28043E0CXC2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28043E0CXC2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28043E0CXC2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28043E0CXC2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28043E0CXC2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28043E0CXC2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28043E0CXC2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.33■■□□□ 1.01
Gm28043E0CXC2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28043E0CXC2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Gm28043E0CXC2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm28043E0CXC2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Gm28043E0CXC2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm28043E0CXC2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28043E0CXC2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.32■■□□□ 1
Gm28043E0CXC2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28043E0CXC2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm28043E0CXC2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.32■■□□□ 1
Gm28043E0CXC2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28043E0CXC2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.32■■□□□ 1
Gm28043E0CXC2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28043E0CXC2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm28043E0CXC2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.31■■□□□ 1
Gm28043E0CXC2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm28043E0CXC2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm28043E0CXC2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.3■■□□□ 1
Gm28043E0CXC2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gm28043E0CXC2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.3■■□□□ 1
Gm28043E0CXC2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm28043E0CXC2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm28043E0CXC2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gm28043E0CXC2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm28043E0CXC2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm28043E0CXC2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Gm28043E0CXC2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm28043E0CXC2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.28■■□□□ 1
Gm28043E0CXC2 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.28■■□□□ 1
Gm28043E0CXC2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Gm28043E0CXC2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Gm28043E0CXC2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28043E0CXC2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gm28043E0CXC2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28043E0CXC2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28043E0CXC2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28043E0CXC2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm28043E0CXC2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28043E0CXC2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28043E0CXC2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28043E0CXC2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Gm28043E0CXC2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm28043E0CXC2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Gm28043E0CXC2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gm28043E0CXC2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm28043E0CXC2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gm28043E0CXC2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm28043E0CXC2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28043E0CXC2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm28043E0CXC2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gm28043E0CXC2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28043E0CXC2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28043E0CXC2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gm28043E0CXC2 Notumos-201ENSMUST00000151998 2659 ntBASIC21.23■□□□□ 0.99
Gm28043E0CXC2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28043E0CXC2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28043E0CXC2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28043E0CXC2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Gm28043E0CXC2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28043E0CXC2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm28043E0CXC2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28043E0CXC2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Gm28043E0CXC2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28043E0CXC2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28043E0CXC2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28043E0CXC2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28043E0CXC2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28043E0CXC2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gm28043E0CXC2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms