Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptchd4B9EKX1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptchd4B9EKX1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptchd4B9EKX1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptchd4B9EKX1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptchd4B9EKX1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptchd4B9EKX1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptchd4B9EKX1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
Ptchd4B9EKX1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptchd4B9EKX1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.3■■□□□ 1.32
Ptchd4B9EKX1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptchd4B9EKX1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.3■■□□□ 1.32
Ptchd4B9EKX1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 Gm22238-201ENSMUST00000175222 88 ntBASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptchd4B9EKX1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptchd4B9EKX1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ptchd4B9EKX1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptchd4B9EKX1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ptchd4B9EKX1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.27■■□□□ 1.32
Ptchd4B9EKX1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptchd4B9EKX1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.27■■□□□ 1.31
Ptchd4B9EKX1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Ptchd4B9EKX1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptchd4B9EKX1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptchd4B9EKX1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptchd4B9EKX1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Ptchd4B9EKX1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptchd4B9EKX1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptchd4B9EKX1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ptchd4B9EKX1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.22■■□□□ 1.31
Ptchd4B9EKX1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Ptchd4B9EKX1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ptchd4B9EKX1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptchd4B9EKX1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptchd4B9EKX1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptchd4B9EKX1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptchd4B9EKX1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ptchd4B9EKX1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptchd4B9EKX1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ptchd4B9EKX1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ptchd4B9EKX1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptchd4B9EKX1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ptchd4B9EKX1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ptchd4B9EKX1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptchd4B9EKX1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ptchd4B9EKX1 Gm13241-201ENSMUST00000094493 780 ntBASIC23.17■■□□□ 1.3
Ptchd4B9EKX1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptchd4B9EKX1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptchd4B9EKX1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ptchd4B9EKX1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ptchd4B9EKX1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptchd4B9EKX1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ptchd4B9EKX1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptchd4B9EKX1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptchd4B9EKX1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptchd4B9EKX1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptchd4B9EKX1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptchd4B9EKX1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptchd4B9EKX1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptchd4B9EKX1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptchd4B9EKX1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Ptchd4B9EKX1 Gm9847-201ENSMUST00000052528 599 ntBASIC23.14■■□□□ 1.29
Ptchd4B9EKX1 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms