Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a5A6H584 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a5A6H584 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a5A6H584 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.75■□□□□ 0.27
Col6a5A6H584 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a5A6H584 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a5A6H584 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.75■□□□□ 0.27
Col6a5A6H584 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a5A6H584 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a5A6H584 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.75■□□□□ 0.27
Col6a5A6H584 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a5A6H584 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a5A6H584 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a5A6H584 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.74■□□□□ 0.27
Col6a5A6H584 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.74■□□□□ 0.27
Col6a5A6H584 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a5A6H584 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.73■□□□□ 0.27
Col6a5A6H584 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.73■□□□□ 0.27
Col6a5A6H584 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Col6a5A6H584 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a5A6H584 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col6a5A6H584 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.73■□□□□ 0.27
Col6a5A6H584 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.72■□□□□ 0.27
Col6a5A6H584 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Col6a5A6H584 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Col6a5A6H584 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.72■□□□□ 0.27
Col6a5A6H584 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col6a5A6H584 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a5A6H584 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a5A6H584 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a5A6H584 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.71■□□□□ 0.27
Col6a5A6H584 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Col6a5A6H584 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col6a5A6H584 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.71■□□□□ 0.27
Col6a5A6H584 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.71■□□□□ 0.27
Col6a5A6H584 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Col6a5A6H584 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col6a5A6H584 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col6a5A6H584 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a5A6H584 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a5A6H584 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col6a5A6H584 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a5A6H584 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a5A6H584 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a5A6H584 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.7■□□□□ 0.26
Col6a5A6H584 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a5A6H584 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a5A6H584 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col6a5A6H584 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a5A6H584 Gm43137-201ENSMUST00000198052 594 ntBASIC16.69■□□□□ 0.26
Col6a5A6H584 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a5A6H584 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a5A6H584 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.68■□□□□ 0.26
Col6a5A6H584 Gm43017-201ENSMUST00000198296 752 ntBASIC16.68■□□□□ 0.26
Col6a5A6H584 Gm42569-201ENSMUST00000200539 472 ntBASIC16.68■□□□□ 0.26
Col6a5A6H584 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.68■□□□□ 0.26
Col6a5A6H584 Gm10493-201ENSMUST00000097270 612 ntBASIC16.68■□□□□ 0.26
Col6a5A6H584 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col6a5A6H584 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a5A6H584 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a5A6H584 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a5A6H584 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a5A6H584 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a5A6H584 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Col6a5A6H584 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a5A6H584 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.67■□□□□ 0.26
Col6a5A6H584 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col6a5A6H584 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a5A6H584 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.66■□□□□ 0.26
Col6a5A6H584 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.66■□□□□ 0.26
Col6a5A6H584 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.66■□□□□ 0.26
Col6a5A6H584 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col6a5A6H584 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.66■□□□□ 0.26
Col6a5A6H584 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.66■□□□□ 0.26
Col6a5A6H584 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.66■□□□□ 0.26
Col6a5A6H584 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Col6a5A6H584 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a5A6H584 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col6a5A6H584 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a5A6H584 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a5A6H584 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col6a5A6H584 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col6a5A6H584 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a5A6H584 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a5A6H584 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms