Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a4A2AX52 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a4A2AX52 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.17■□□□□ 0.5
Col6a4A2AX52 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a4A2AX52 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a4A2AX52 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a4A2AX52 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a4A2AX52 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Col6a4A2AX52 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a4A2AX52 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a4A2AX52 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a4A2AX52 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a4A2AX52 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.16■□□□□ 0.5
Col6a4A2AX52 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a4A2AX52 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.15■□□□□ 0.5
Col6a4A2AX52 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.15■□□□□ 0.5
Col6a4A2AX52 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a4A2AX52 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a4A2AX52 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col6a4A2AX52 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.15■□□□□ 0.5
Col6a4A2AX52 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.15■□□□□ 0.5
Col6a4A2AX52 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.15■□□□□ 0.5
Col6a4A2AX52 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a4A2AX52 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a4A2AX52 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.14■□□□□ 0.49
Col6a4A2AX52 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.14■□□□□ 0.49
Col6a4A2AX52 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a4A2AX52 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a4A2AX52 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a4A2AX52 Gm18284-201ENSMUST00000172604 624 ntBASIC18.13■□□□□ 0.49
Col6a4A2AX52 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a4A2AX52 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a4A2AX52 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Col6a4A2AX52 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a4A2AX52 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a4A2AX52 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a4A2AX52 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.12■□□□□ 0.49
Col6a4A2AX52 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a4A2AX52 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a4A2AX52 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col6a4A2AX52 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.11■□□□□ 0.49
Col6a4A2AX52 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a4A2AX52 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a4A2AX52 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a4A2AX52 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a4A2AX52 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a4A2AX52 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a4A2AX52 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a4A2AX52 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a4A2AX52 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a4A2AX52 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a4A2AX52 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a4A2AX52 Gm29257-201ENSMUST00000186115 639 ntBASIC18.1■□□□□ 0.49
Col6a4A2AX52 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.1■□□□□ 0.49
Col6a4A2AX52 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a4A2AX52 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a4A2AX52 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Col6a4A2AX52 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col6a4A2AX52 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Col6a4A2AX52 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.08■□□□□ 0.48
Col6a4A2AX52 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col6a4A2AX52 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col6a4A2AX52 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.08■□□□□ 0.48
Col6a4A2AX52 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col6a4A2AX52 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col6a4A2AX52 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col6a4A2AX52 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col6a4A2AX52 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.07■□□□□ 0.48
Col6a4A2AX52 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.07■□□□□ 0.48
Col6a4A2AX52 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col6a4A2AX52 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.06■□□□□ 0.48
Col6a4A2AX52 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col6a4A2AX52 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col6a4A2AX52 Gm6139-201ENSMUST00000079261 882 ntBASIC18.06■□□□□ 0.48
Col6a4A2AX52 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col6a4A2AX52 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col6a4A2AX52 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col6a4A2AX52 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.05■□□□□ 0.48
Col6a4A2AX52 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Gm8495-201ENSMUST00000188740 694 ntBASIC18.05■□□□□ 0.48
Col6a4A2AX52 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.05■□□□□ 0.48
Col6a4A2AX52 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Col6a4A2AX52 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col6a4A2AX52 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
Col6a4A2AX52 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms