Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.33■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Atg4a-psA0A0G2JFS9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Atg4a-psA0A0G2JFS9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC26.3■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Atg4a-psA0A0G2JFS9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atg4a-psA0A0G2JFS9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atg4a-psA0A0G2JFS9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Atg4a-psA0A0G2JFS9 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.26■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Atg4a-psA0A0G2JFS9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.23■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.23■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.22■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
Atg4a-psA0A0G2JFS9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.18■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Gm13238-201ENSMUST00000117655 780 ntBASIC26.18■■□□□ 1.78
Atg4a-psA0A0G2JFS9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms