Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav9n-2A0A0G2JDP3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav9n-2A0A0G2JDP3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gm12366-201ENSMUST00000121722 873 ntBASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Gm5786-201ENSMUST00000085368 882 ntBASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9n-2A0A0G2JDP3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9n-2A0A0G2JDP3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms